Pseudomonas species BIOMIG1BAC |
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Putative Pseudomonas species BIOMIG1BAC RM systems
Ref: Ertekin,E. et al. Environ. Sci. Technol. 50 (8), 4304-4313 (2016)
REBASE ref # 30602
Complete sequence: 7,675,262 bp
GenBank #: CP049045
REBASE acronym: PspBAC
Org_num: 40840
All begin ATY02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5085 | restriction endonuclease | |||
| 5090 | S | S.Pfl17298ORFFP (36% identity) | S3.PspBACORF5110P | |
| 5095 | S | S.Pfl17298ORFFP (13% identity) | S2.PspBACORF5110P | |
| 5100 | IS630-like element ISPa47 family transposase | |||
| 5105 | S | S.Pfl17298ORFFP (25% identity) | S1.PspBACORF5110P | |
| 5110 | M | M.Pfl17298ORFFP (100% identity) | M.PspBACORF5110P | |
| 5115 | transcriptional regulator | |||
| 5120 | R | Pfl17298ORFFP (87% identity) | PspBACORF5110P | |
| 5125 | 91 aa hypothetical protein | |||
| 12040 | integrase | |||
| 12045 | M | M.PspBACORF32640P (100% identity) | M.PspBACORF12045P | |
| 12050 | S | S1.PspBACORF32640P (100% identity) | S1.PspBACORF12045P | |
| 12055 | S | S2.PspBACORF32640P (100% identity) | S2.PspBACORF12045P | |
| 12060 | R | PspBACORF32640P (100% identity) | PspBACORF12045P | |
| 12065 | M48 family metallopeptidase | |||
| 32635 | integrase | |||
| 32640 | M | M.PspBACORF12045P (100% identity) | M.PspBACORF32640P | |
| 32645 | S | S1.PspBACORF12045P (100% identity) | S1.PspBACORF32640P | |
| 32650 | S | S2.PspBACORF12045P (100% identity) | S2.PspBACORF32640P | |
| 32655 | R | PspBACORF12045P (100% identity) | PspBACORF32640P | |
| 32660 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10600 | 99 aa hypothetical protein | |||
| 10605 | M | M.PfrNMC25ORF13780P (84% identity) | M.PspBACORF10605P | |
| 10610 | 203 aa hypothetical protein | |||
| 20905 | DUF2971 domain-containing protein | |||
| 20910 | M | M.Ppi75ORF19940P (92% identity) | M.PspBACORF20910P | |
| 20915 | 202 aa hypothetical protein | |||
| 22570 | 78 aa hypothetical protein | |||
| 22575 | M | M.Pprpf5ORF14745P (96% identity) | M.PspBACORF22575P | |
| 22580 | Pyocin activator protein PrtN | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5080 | 189 aa hypothetical protein | |||
| 5085 | R | Pfl17298Mrr2P (100% identity) | PspBACMrrP | |
| 5090 | type I restriction endonuclease subunit S | |||