Yokenella regensburgei NCTC11968 |
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Putative Yokenella regensburgei NCTC11968 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,951,559 bp
GenBank #: UAVM00000000 (NZ_UAVM00000000)
REBASE acronym: Yre11968
Org_num: 42865
All begin NCTC11968_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3541 | Transposase | |||
| 3542 | R | Yre11967IP (100% identity) | GCANNNNNNCTGG | Yre11968IP |
| 3543 | Uncharacterized protein conserved in bacteria | |||
| 3544 | S | S.Yre11967I (100% identity) | GCANNNNNNCTGG | S.Yre11968I |
| 3545 | M | M.Yre11967I (100% identity) | GCANNNNNNCTGG | M.Yre11968I |
| 3546 | Uncharacterised protein | |||
| 2726 | EcoKMrr | |||
| 2727 | M | M.Yre11967II (100% identity) | GACNNNNNNGTCA | M.Yre11968II |
| 2728 | S | S.Yre11967II (100% identity) | GACNNNNNNGTCA | S.Yre11968II |
| 2729 | R | Yre11967IIP (100% identity) | GACNNNNNNGTCA | Yre11968IIP |
| 2731 | Predicted membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4792 | Uncharacterised protein | |||
| 4793 | M | M.Yre11967ORF1887P (100% identity) | M.Yre11968ORF4837P | |
| 4794 | Uncharacterised protein | |||
| 4795 | Uncharacterised protein | |||
| 4796 | M | M.Yre11967ORF1890P (100% identity) | M.Yre11968ORF4796P | |
| 4797 | Bacteriophage replication gene A protein (GPA) | |||
| 4798 | Uncharacterised protein | |||
| 4799 | M | M.Yre11967ORF1893P (100% identity) | M.Yre11968ORF4799P | |
| 4800 | phage portal protein, PBSX family | |||
| 4383 | cell division protein DamX | |||
| 4384 | M | M.YreW13DamP (100% identity) | M.Yre11968DamP | |
| 4385 | Ribulose-phosphate 3-epimerase | |||
| 3662 | Plasmid stability protein | |||
| ??? | M | M.Yre11967ORF4468P (100% identity) | M.Yre11968ORF3663P | |
| 3664 | R | Yre11967ORF4468P (100% identity) | Yre11968ORF3663P | |
| 3665 | Uncharacterised protein | |||
| 613 | Uncharacterised protein | |||
| ??? | M | M.YreW13DcmP (100% identity) | M.Yre11968DcmP | |
| 615 | V | V.Yre11967DcmP (100% identity) | V.Yre11968DcmP | |
| 616 | Uncharacterized inner membrane transporter yedA | |||
| 2829 | ParB-like nuclease domain | |||
| 2830 | M | M.Yre11967III (100% identity) | TGGCCA | M.Yre11968III |
| 2831 | Prophage CP4-57 integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2725 | Uncharacterized protein conserved in bacteria | |||
| 2726 | R | Yre11967MrrP (100% identity) | Yre11968MrrP | |
| 2727 | Type I restriction enzyme EcoKI M protein | |||