Yersinia pseudotuberculosis NCTC1103 |
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Putative Yersinia pseudotuberculosis NCTC1103 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,668,003 bp
GenBank #: UHJD00000000 (NZ_UHJD00000000)
REBASE acronym: Yps1103
Org_num: 42859
All begin NCTC1103_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3714 | Type I restriction modification DNA specificity | |||
| 3715 | M | M.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | M.Yps1103II |
| 3716 | S | S1.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | S.Yps1103II |
| 3717 | Virulence protein | |||
| 3718 | R | YpsST42ORFAP (100% identity) | TGACNNNNNCTC | Yps1103IIP |
| 3719 | metal-dependent hydrolase | |||
| 2201 | M48 peptidase family protein | |||
| 2202 | M | M.YpsMD67I (100% identity) | CYGANNNNNNCTG | M.Yps1103I |
| 2203 | S | S.YpsST42ORFCP (100% identity) | CYGANNNNNNCTG | S.Yps1103I |
| 2204 | R | YpsST42ORFCP (100% identity) | CYGANNNNNNCTG | Yps1103IP |
| 2205 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3871 | membrane protein, interferes with cell division | |||
| 3872 | M | M.Ysi228DamP (100% identity) | GATC | M.Yps1103DamP |
| 3873 | ribulose-phosphate 3-epimerase | |||
| 3047 | Protein of uncharacterised function (DUF1367) | |||
| 3048 | M | M.YpsAORF1799P (94% identity) | M.Yps1103ORF3048P | |
| 3049 | adenine-specific modification | |||
| 3049 | adenine-specific modification | |||
| 3050 | M | M.Ysi228ORF18130P (100% identity) | M.Yps1103ORF3050P | |
| 3051 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3719 | metal-dependent hydrolase | |||
| 3720 | R | YpsYpse1MrrP (100% identity) | Yps1103MrrP | |
| 3721 | Protein of uncharacterised function (DUF3296) | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2763 | Orf81 bacteriophage 186 | |||
| 2764 | M | M.YpsMD67ORF1128P (100% identity) | M.Yps1103ORF2764P | |
| 2765 | C-5 cytosine-specific DNA methylase | |||
| 3048 | cytosine-specific modification | |||
| 3049 | M | M.Ysi228ORF18135P (100% identity) | M.Yps1103ORF3049P | |
| 3050 | DNA methyltransferase | |||