Putative Yersinia pseudotuberculosis NCTC10278 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,404,361 bp
GenBank #: UAVK00000000 (NZ_UAVK00000000)
REBASE acronym: Yps10278
Org_num: 42855
All begin NCTC10278_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1947 | type I restriction-modification system, M | |||
1948 | R | R1.YpsYPIP (100% identity) | CRAANNNNNNCTC | R1.Yps10278IP |
1949 | Uncharacterised protein | |||
1950 | integrase family protein | |||
1951 | Uncharacterised protein | |||
1952 | Uncharacterised protein | |||
1953 | 5-methylcytosine-specific restriction enzyme | |||
1954 | M | M.Yps579ORF10470P (100% identity) | CRAANNNNNNCTC | M.Yps10278I |
1955 | S | S.YpsYPI (100% identity) | CRAANNNNNNCTC | S.Yps10278I |
1956 | R | R2.YpsYPIP (100% identity) | CRAANNNNNNCTC | R2.Yps10278IP |
1958 | integrase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
225 | ribulose-phosphate 3-epimerase | |||
226 | M | M.Ysi228DamP (100% identity) | GATC | M.Yps10278DamP |
227 | membrane protein, interferes with cell division | |||
270 | tail assembly chaperone gp38 | |||
271 | M | M.YpsYPORF181P (100% identity) | M.Yps10278ORF271P | |
272 | adenosine nucleotide hydrolase NudE | |||
373 | Uncharacterised protein | |||
374 | M | M.YpsYPORF65P (100% identity) | M.Yps10278ORF374P | |
375 | R | Espc25ORF20230P (47% identity) | Yps10278ORF374P | |
376 | Uncharacterised protein | |||
3239 | phage replication protein | |||
3240 | M | M2.YpsYPORF2320P (100% identity) | M1.Yps10278ORF3240P | |
3241 | M | M1.YpsYPORF2320P (100% identity) | M2.Yps10278ORF3240P | |
3242 | Orf81 bacteriophage 186 | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
3922 | gpB bacteriophage P2-like protein | |||
3923 | M | M.YpsYPORF888P (100% identity) | M.Yps10278ORF3923P | |
3924 | Protein of uncharacterised function (DUF2732) |