Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 4,404,361 bp

GenBank #: UAVK00000000 (NZ_UAVK00000000)

REBASE acronym: Yps10278

Org_num: 42855

 

All begin NCTC10278_

Type I
ORF Gene Most similar Specificity Name
 
1947 type I restriction-modification system, M
1948 R R1.YpsYPIP (100% identity) CRAANNNNNNCTC R1.Yps10278IP
1949 Uncharacterised protein
1950 integrase family protein
1951 Uncharacterised protein
1952 Uncharacterised protein
1953 5-methylcytosine-specific restriction enzyme
1954 M M.Yps579ORF10470P (100% identity) CRAANNNNNNCTC M.Yps10278I
1955 S S.YpsYPI (100% identity) CRAANNNNNNCTC S.Yps10278I
1956 R R2.YpsYPIP (100% identity) CRAANNNNNNCTC R2.Yps10278IP
1958 integrase
Type II
ORF Gene Most similar Specificity Name
 
225 ribulose-phosphate 3-epimerase
226 M M.Ysi228DamP (100% identity) GATC M.Yps10278DamP
227 membrane protein, interferes with cell division
 
270 tail assembly chaperone gp38
271 M M.YpsYPORF181P (100% identity) M.Yps10278ORF271P
272 adenosine nucleotide hydrolase NudE
 
373 Uncharacterised protein
374 M M.YpsYPORF65P (100% identity) M.Yps10278ORF374P
375 R Espc25ORF20230P (47% identity) Yps10278ORF374P
376 Uncharacterised protein
 
3239 phage replication protein
3240 M M2.YpsYPORF2320P (100% identity) M1.Yps10278ORF3240P
3241 M M1.YpsYPORF2320P (100% identity) M2.Yps10278ORF3240P
3242 Orf81 bacteriophage 186
Orphan M
ORF Gene Most similar Specificity Name
 
3922 gpB bacteriophage P2-like protein
3923 M M.YpsYPORF888P (100% identity) M.Yps10278ORF3923P
3924 Protein of uncharacterised function (DUF2732)
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