Yersinia kristensenii NCTC11471 |
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Putative Yersinia kristensenii NCTC11471 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,733,508 bp
GenBank #: UHIY00000000 (NZ_UHIY00000000)
REBASE acronym: Ykr11471
Org_num: 42852
All begin NCTC11471_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 683 | RNA 2-phosphotransferase | |||
| 684 | R | Ykr415IP (100% identity) | CACNNNNNNCTAA | Ykr11471IP |
| 685 | S | S.YkrORF13480P (100% identity) | CACNNNNNNCTAA | S.Ykr11471I |
| 686 | M | M.Ykr415I (100% identity) | CACNNNNNNCTAA | M.Ykr11471I |
| 687 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4360 | Uncharacterised protein | |||
| 4361 | M | M.YkrORF2570P (80% identity) | M.Ykr11471ORF4361P | |
| 4362 | Uncharacterised protein | |||
| 196 | Protein of uncharacterised function (DUF968) | |||
| 197 | M | M.Ykr415ORF8865P (100% identity) | M1.Ykr11471ORF197P | |
| 198 | M | M.Ykr415ORF8870P (99% identity) | M2.Ykr11471ORF197P | |
| 199 | Uncharacterised protein | |||
| 652 | restriction endonuclease | |||
| 653 | R | YkrORF13790P (93% identity) | Ykr11471IIP | |
| 654 | M | M.Ykr415II (100% identity) | GAAGG | M.Ykr11471II |
| 655 | Uncharacterised protein | |||
| 1138 | ribulose-phosphate 3-epimerase | |||
| 1139 | M | M.Ykr60538DamP (100% identity) | GATC | M.Ykr11471DamP |
| 1140 | damx, an inner membrane protein involved in bile | |||
| 2918 | phage-related capsid packaging protein | |||
| 2919 | R | YkrORF38460P (100% identity) | Ykr11471ORF2920P | |
| 2920 | M | M.Ykr415ORF795P (98% identity) | M.Ykr11471ORF2920P | |
| 2921 | Uncharacterized protein encoded in hypervariable | |||
| 2921 | Uncharacterized protein encoded in hypervariable | |||
| 2922 | R | YkrI (100% identity) | C | Ykr11471ORF2922P |
| 2923 | Uncharacterised protein | |||
| 3810 | PD-(D/E)XK nuclease superfamily | |||
| 3811 | M | M.YkrORF2570P (100% identity) | M.Ykr11471ORF3811P | |
| 3812 | Uncharacterised protein | |||
| 4221 | Mu-like prophage protein Com | |||
| 4222 | M | M.YkrORF6810P (98% identity) | M.Ykr11471ORF4222P | |
| 4223 | VacJ lipoprotein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 218 | RES domain | |||
| 219 | R | YkrORF9010P (100% identity) | Ykr11471ORF220P | |
| 220 | M | M.YkrORF9010P (97% identity) | M.Ykr11471ORF220P | |
| 221 | ATP-dependent DNA helicase pcrA | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3954 | replication gene A | |||
| 3955 | M | M.YenGp2ORF8065P (97% identity) | M.Ykr11471ORF3955P | |
| 3956 | Protein of uncharacterised function (DUF2732) | |||