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Putative Yersinia frederiksenii NCTC11470 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,004,305 bp
GenBank #: UHJA00000000 (NZ_UHJA00000000)
REBASE acronym: Yfr11470
Org_num: 42851
All begin NCTC11470_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3340 | integrase | |||
3341 | M | M.Yfr418I (100% identity) | CACNNNNNNNTTYG | M.Yfr11470I |
3342 | S | S.Yfr418I (100% identity) | CACNNNNNNNTTYG | S.Yfr11470I |
3343 | Uncharacterized protein conserved in bacteria | |||
3344 | R | Yfr418IP (100% identity) | CACNNNNNNNTTYG | Yfr11470IP |
3345 | Uncharacterised protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
15 | Uncharacterised protein | |||
16 | R | Yfr418ORF13320P (100% identity) | Yfr11470ORF17P | |
17 | M | M.Yfr418ORF13320P (98% identity) | M.Yfr11470ORF17P | |
18 | Uncharacterized protein encoded in hypervariable | |||
52 | Uncharacterised protein | |||
53 | R | Yfr418ORF13320P (100% identity) | Yfr11470ORF54P | |
54 | M | M.Yfr418ORF13320P (98% identity) | M.Yfr11470ORF54P | |
55 | Uncharacterized protein encoded in hypervariable | |||
100 | Uncharacterised protein | |||
101 | M | M.Yfr418ORF13105P (100% identity) | M1.Yfr11470ORF101P | |
102 | M | M.Yfr418ORF13100P (100% identity) | M2.Yfr11470ORF101P | |
103 | GP46 protein | |||
174 | phage replication protein | |||
175 | M | M.Yfr418ORF12720P (100% identity) | M.Yfr11470ORF175P | |
176 | Protein of uncharacterised function (DUF2732) | |||
2406 | Crossover junction endodeoxyribonuclease rusA | |||
2407 | M | M.Ysp1934ORF3350P (75% identity) | M.Yfr11470ORF2407P | |
2408 | Conserved phage C-terminus (Phg_2220_C) | |||
2552 | ribulose-phosphate 3-epimerase | |||
2553 | M | M.Yfr418DamP (100% identity) | GATC | M.Yfr11470DamP |
2554 | damx, an inner membrane protein involved in bile | |||
2751 | protein YidR | |||
2752 | R | Yfr418ORF35P (99% identity) | Yfr11470ORF2754P | |
2753 | V | V.Yfr418ORF35P (100% identity) | V.Yfr11470ORF2754P | |
??? | M | M.Yfr418ORF35P (97% identity) | M.Yfr11470ORF2754P | |
2755 | yheo-like PAS domain | |||
3382 | permease | |||
3383 | R | Yfr418ORF19450P (100% identity) | Yfr11470ORF3383P | |
3384 | glycoprotein/receptor |