Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 5,004,305 bp

GenBank #: UHJA00000000 (NZ_UHJA00000000)

REBASE acronym: Yfr11470

Org_num: 42851

 

All begin NCTC11470_

Type I
ORF Gene Most similar Specificity Name
 
3340 integrase
3341 M M.Yfr418I (100% identity) CACNNNNNNNTTYG M.Yfr11470I
3342 S S.Yfr418I (100% identity) CACNNNNNNNTTYG S.Yfr11470I
3343 Uncharacterized protein conserved in bacteria
3344 R Yfr418IP (100% identity) CACNNNNNNNTTYG Yfr11470IP
3345 Uncharacterised protein
Type II
ORF Gene Most similar Specificity Name
 
15 Uncharacterised protein
16 R Yfr418ORF13320P (100% identity) Yfr11470ORF17P
17 M M.Yfr418ORF13320P (98% identity) M.Yfr11470ORF17P
18 Uncharacterized protein encoded in hypervariable
 
52 Uncharacterised protein
53 R Yfr418ORF13320P (100% identity) Yfr11470ORF54P
54 M M.Yfr418ORF13320P (98% identity) M.Yfr11470ORF54P
55 Uncharacterized protein encoded in hypervariable
 
100 Uncharacterised protein
101 M M.Yfr418ORF13105P (100% identity) M1.Yfr11470ORF101P
102 M M.Yfr418ORF13100P (100% identity) M2.Yfr11470ORF101P
103 GP46 protein
 
174 phage replication protein
175 M M.Yfr418ORF12720P (100% identity) M.Yfr11470ORF175P
176 Protein of uncharacterised function (DUF2732)
 
2406 Crossover junction endodeoxyribonuclease rusA
2407 M M.Ysp1934ORF3350P (75% identity) M.Yfr11470ORF2407P
2408 Conserved phage C-terminus (Phg_2220_C)
 
2552 ribulose-phosphate 3-epimerase
2553 M M.Yfr418DamP (100% identity) GATC M.Yfr11470DamP
2554 damx, an inner membrane protein involved in bile
 
2751 protein YidR
2752 R Yfr418ORF35P (99% identity) Yfr11470ORF2754P
2753 V V.Yfr418ORF35P (100% identity) V.Yfr11470ORF2754P
??? M M.Yfr418ORF35P (97% identity) M.Yfr11470ORF2754P
2755 yheo-like PAS domain
 
3382 permease
3383 R Yfr418ORF19450P (100% identity) Yfr11470ORF3383P
3384 glycoprotein/receptor
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