Vibrio vulnificus NCTC13647 |
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Putative Vibrio vulnificus NCTC13647 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,988,619 bp
GenBank #: UHIW00000000 (NZ_UHIW00000000)
REBASE acronym: Vvu13647
Org_num: 42660
All begin NCTC13647_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3130 | integrase family protein | |||
| 3131 | M | M.VvuB2ORFDP (100% identity) | TCCANNNNNGTG | M.Vvu13647II |
| 3132 | S | S.VvuB2ORFDP (100% identity) | TCCANNNNNGTG | S.Vvu13647II |
| 3133 | exonuclease V subunit alpha | |||
| 3134 | Uncharacterised protein | |||
| 3135 | R | VvuB2ORFEP (100% identity) | TCCANNNNNGTG | Vvu13647IIP |
| 3136 | molybdenum cofactor biosysynthesis protein | |||
| 756 | Protein of uncharacterised function (DUF3800) | |||
| 757 | S | S.VvuB2ORFBP (100% identity) | RAACNNNNNNNNTGGC | S.Vvu13647I |
| 758 | M | M.VvuB2ORFBP (100% identity) | RAACNNNNNNNNTGGC | M.Vvu13647I |
| 759 | Na+-driven multidrug efflux pump | |||
| 760 | R | VvuB2ORFBP (100% identity) | RAACNNNNNNNNTGGC | Vvu13647IP |
| 761 | GGDEF domain-containing protein | |||
| 4622 | integrase family protein | |||
| ??? | M | M.VvuB2ORFDP (100% identity) | M.Vvu13647ORF4623P | |
| 4625 | S | S.VvuB2ORFDP (23% identity) | S1.Vvu13647ORF4623P | |
| 4626 | S | S.VvuB2ORFDP (29% identity) | S2.Vvu13647ORF4623P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3185 | DNA polymerase III subunit alpha | |||
| 3186 | M | M.VvuB2ORFFP (100% identity) | M.Vvu13647ORF3186P | |
| 3187 | R | Vvu663ORF1020P (100% identity) | Vvu13647ORF3186P | |
| 3188 | Uncharacterised protein | |||
| 2106 | DamX-like protein | |||
| 2107 | M | M.VvuV252DamP (100% identity) | GATC | M.Vvu13647Dam |
| 2108 | ribulose-phosphate 3-epimerase | |||
| 2855 | alanine transporter | |||
| 2857 | R | Vvu663DptFP (100% identity) | Vvu13647DptFP | |
| 2858 | dnd system-associated protein 1 | |||
| 2857 | dnd system-associated protein 3 | |||
| 2858 | R | Vvu663DptGP (88% identity) | Vvu13647DptGP | |
| ??? | hypothetical protein | |||
| 2858 | dnd system-associated protein 1 | |||
| ??? | R | Vvu663DptHP (100% identity) | Vvu13647DptHP | |
| 2861 | Uncharacterised protein | |||
| 2865 | dnd system-associated protein 4 | |||
| 2866 | M | M.Vvu663DndEP (100% identity) | M.Vvu13647DndEP | |
| 2867 | DNA sulfur modification protein DndD | |||
| 2866 | DNA sulfur modification protein DndE | |||
| 2867 | M | M.Vvu663DndDP (100% identity) | M.Vvu13647DndDP | |
| ??? | hypothetical protein | |||
| 2867 | DNA sulfur modification protein DndD | |||
| ??? | M | M.Vvu663DndCP (99% identity) | M.Vvu13647DndCP | |
| 2870 | DNA sulfur modification protein DndB | |||
| ??? | hypothetical protein | |||
| 2870 | M | M.Vvu663DndBP (100% identity) | M.Vvu13647DndBP | |
| 2871 | DNA phosphorothioation-associated putative | |||