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Putative Uncultured Avibacterium sp. RM systems
Ref:
REBASE ref # 22501
GenBank #: CAAHDN000000000
REBASE acronym: Uav33940
Org_num: 42769
All begin NCTC4101_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
??? | M | M.Uav33940II (55% identity) | AAAYNNNNNRTAA | M.Uav33940I |
898 | S | S.Uav33940II (66% identity) | AAAYNNNNNRTAA | S.Uav33940I |
899 | Virulence protein | |||
2336 | S | S.Uav33940II (41% identity) | S.Uav33940ORF2337P | |
2337 | M | M.Uav33940II (96% identity) | M.Uav33940ORF2337P | |
1610 | Type I restriction modification DNA specificity | |||
1611 | M | M.Apa333ORF940P (99% identity) | CCANNNNNNRTAA | M.Uav33940II |
1612 | S | S.Uav33940I (66% identity) | CCANNNNNNRTAA | S.Uav33940II |
1613 | Virulence protein | |||
45 | Divergent AAA domain | |||
46 | R | GanBJF12ORF12720P (97% identity) | Uav33940ORF46P | |
47 | S | S3.GanBJF12ORF12720P (95% identity) | S.Uav33940ORF46P | |
48 | Recombination protein O | |||
218 | Uncharacterised protein | |||
219 | R | Apa333ORF4470P (97% identity) | Uav33940ORF224P | |
220 | Uncharacterised protein | |||
221 | MTH538 TIR-like domain (DUF1863) | |||
222 | Uncharacterised protein | |||
223 | S | S.Asp21595ORF3920P (49% identity) | S.Uav33940ORF224P | |
224 | M | M.Aav11297I (97% identity) | M.Uav33940ORF224P | |
225 | Type I restriction-modification system | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3 | Transposase | |||
??? | RM | ApaAP2ORF11770P (92% identity) | Uav33940ORF7P | |
6 | M | M2.ApaAP2ORF11770P (86% identity) | M2.Uav33940ORF7P | |
7 | M | M1.ApaAP2ORF11770P (95% identity) | M1.Uav33940ORF7P | |
8 | Helix-turn-helix | |||
537 | Uncharacterised protein | |||
538 | M | M.Apa4211ORF2010P (92% identity) | M.Uav33940ORF538P | |
539 | Protein of uncharacterised function (DUF1367) | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
499 | 3-dehydroquinate synthase | |||
??? | M | M.HgaII (95% identity) | M.Uav33940ORF500P | |
501 | Protein of uncharacterised function (DUF721) |