Streptococcus pneumoniae NCTC13754 |
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Putative Streptococcus pneumoniae NCTC13754 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,181,896 bp
GenBank #: UHGE00000000 (NZ_UHGE00000000)
REBASE acronym: Spn13754
Org_num: 42737
All begin NCTC13754_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2241 | heat-inducible transcription repressor | |||
| 2242 | R | Spn13754IP (100% identity) | CACNNNNNNNNTTC | Spn13754IIP |
| 2243 | M | M.Spns521I (100% identity) | CACNNNNNNNNTTC | M.Spn13754II |
| 2244 | S | S3.SpnPORF531P (100% identity) | CACNNNNNNNNTTC | S1.Spn13754II |
| 2245 | S | S2.Spns521I (90% identity) | S2.Spn13754IIP | |
| 2246 | integrase/recombinase, phage integrase family | |||
| 2247 | S | S4.Spn6635ORF543P (100% identity) | S3.Spn13754IIP | |
| 2248 | Uncharacterised protein | |||
| 21 | type I restriction-modification system, S | |||
| 22 | S | S1.Spns521I (45% identity) | S3.Spn13754IP | |
| 23 | S | S2.Spns521I (83% identity) | S2.Spn13754IP | |
| 24 | integrase/recombinase, phage integrase family | |||
| 25 | S | S1.SpnST62ORF4110P (100% identity) | CACNNNNNNNCTG | S1.Spn13754I |
| 26 | M | M.Spns521I (100% identity) | CACNNNNNNNCTG | M.Spn13754I |
| 27 | R | Spn13754IIP (100% identity) | CACNNNNNNNCTG | Spn13754IP |
| 28 | Protein of uncharacterised function (DUF2812) | |||
| 11 | restriction endonuclease S subunit | |||
| 12 | M | M.Spns521I (93% identity) | M.Spn13754ORF12P | |
| 13 | S | Spn11899IIP (48% identity) | S.Spn13754ORF12P | |
| 122 | carbamoylphosphate synthase large subunit | |||
| 123 | M | M.Spns521II (100% identity) | M.Spn13754ORF123P | |
| 124 | S | S1.SpnJJAORF826P (70% identity) | S.Spn13754ORF123P | |
| 125 | R | SpnN214ORF4780P (100% identity) | Spn13754ORF123P | |
| 126 | chlorohydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 261 | Uncharacterised protein | |||
| 262 | M | M.Spns521ORF6230P (100% identity) | M.Spn13754ORF262P | |
| 263 | Uncharacterised protein | |||
| 492 | L-lactate dehydrogenase 1 | |||
| 493 | RM | SpnsD39dORF4855BP (100% identity) | TCGAG | Spn13754IIIB |
| 494 | RM | SpnsD39dORF4855AP (100% identity) | TCGAG | Spn13754IIIA |
| 495 | cytotoxic translational repressor of | |||
| 682 | U32 family peptidase | |||
| ??? | R | Spn0240ORF1283P (100% identity) | TCTAGA | Spn13754IVP |
| 685 | M | M.Spns521III (100% identity) | TCTAGA | M.Spn13754IV |
| 686 | AraC family transcriptional regulator | |||
| 1057 | dpnD protein | |||
| 1058 | R | Spns521ORF2195P (100% identity) | GATC | Spn13754ORF1058P |
| 1059 | thioesterase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 521 | GMP reductase | |||
| 522 | R | SpnCGMcrCP (100% identity) | Spn13754McrCP | |
| 523 | R | SpnXen35McrBP (99% identity) | Spn13754McrBP | |
| 524 | translation factor | |||