Streptococcus pneumoniae NCTC12140 |
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Putative Streptococcus pneumoniae NCTC12140 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,271,083 bp
GenBank #: UHGR00000000 (NZ_UHGR00000000)
REBASE acronym: Spn12140
Org_num: 42732
All begin NCTC12140_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2370 | Uncharacterised protein | |||
| 2371 | S | S2.SpnL1900ORF2320P (100% identity) | CACNNNNNNNNTTC | S.Spn12140I |
| 2372 | type I restriction enzyme | |||
| 1523 | Uncharacterised protein | |||
| 1524 | S | S2.Spn6384ORF511P (100% identity) | CACNNNNNNNCTG | S4.Spn12140IV |
| 1525 | integrase/recombinase, phage integrase family | |||
| 1526 | S | S2.Spns521I (90% identity) | S3.Spn12140IVP | |
| 1527 | S | S3.Spn11897ORF2284P (100% identity) | S2.Spn12140IVP | |
| 1528 | S | S1.Spn11898ORF589P (99% identity) | S1.Spn12140IVP | |
| 1529 | M | M.Sps7493ORF8970P (100% identity) | CACNNNNNNNCTG | M.Spn12140IV |
| 1530 | R | Spn96ORF4545P (100% identity) | CACNNNNNNNCTG | Spn12140IVP |
| 1531 | Protein of uncharacterised function (DUF2812) | |||
| 1870 | carbamoylphosphate synthase large subunit | |||
| 1871 | M | M.SpnsD39dORF3010P (100% identity) | GAYNNNNNNTATC | M.Spn12140II |
| 1872 | S | S1.Spn75752II (100% identity) | GAYNNNNNNTATC | S1.Spn12140II |
| 1873 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 1874 | prophage maintenance system killer protein | |||
| 1875 | integrase/recombinase, phage integrase family | |||
| 1876 | type I RM modification enzyme | |||
| 1877 | R | SpnPF1ORF8420P (100% identity) | GAYNNNNNNTATC | Spn12140IIP |
| 1878 | arginine repressor | |||
| 1875 | integrase/recombinase, phage integrase family | |||
| 1876 | S | S3.Spn96ORF2860P (100% identity) | TCANNNNNNNTATC | S.Spn12140V |
| 1877 | type I restriction-modification system R | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 555 | thioesterase | |||
| 556 | R | SpnsD39dORF3910P (100% identity) | GATC | Spn12140ORF556P |
| 557 | dpnD protein | |||
| 984 | AraC family transcriptional regulator | |||
| 985 | M | M.Spnp2ORF13400P (86% identity) | TCTAGA | M.Spn12140III |
| 986 | restriction endonuclease R.XbaI | |||
| 984 | AraC family transcriptional regulator | |||
| 985 | M | M.Spnp2ORF13400P (86% identity) | TCTAGA | M.Spn12140ORF985 |
| ??? | R | SpnTIGR4ORF6680P (95% identity) | TCTAGA | Spn12140ORF985P |
| 988 | U32 family peptidase | |||
| 1022 | arsenate reductase-like glutaredoxin family | |||
| 1023 | M | M.Spnd6c8ORF1114P (100% identity) | M.Spn12140ORF1080P | |
| 1024 | IS1380-Spn1 transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2228 | GMP reductase | |||
| 2229 | R | Spn71McrCP (100% identity) | Spn12140McrCP | |
| 2230 | R | Spn96McrBP (100% identity) | Spn12140McrBP | |
| 2231 | translation factor | |||