Streptococcus pneumoniae NCTC11899 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus pneumoniae NCTC11899 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,117,552 bp
GenBank #: UHGS00000000 (NZ_UHGS00000000)
REBASE acronym: Spn11899
Org_num: 42724
All begin NCTC11899_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2171 | type I restriction enzyme | |||
| 2172 | S | S1.Spn41ORFCP (100% identity) | CRAANNNNNNNNNTTC | S1.Spn11899ORF2173P |
| 2173 | type I restriction-modification system M | |||
| 2171 | S | S1.SpnsD39dORF10335P (100% identity) | S2.Spn11899IIP | |
| 2172 | type I restriction-modification system, S | |||
| 2173 | M | M.Spnp5ORF4640P (100% identity) | CACNNNNNNNNTTC | M.Spn11899II |
| ??? | R | Spn11897ORF2284P (89% identity) | CACNNNNNNNNTTC | Spn11899IIP |
| 2177 | Protein of uncharacterised function (DUF2812) | |||
| 2183 | heat-inducible transcription repressor | |||
| 2184 | R | Spn6A10ORF508P (100% identity) | CRAANNNNNNNNCTG | Spn11899IIIP |
| 2185 | M | M.Spnp5ORF4640P (100% identity) | CRAANNNNNNNNCTG | M.Spn11899III |
| 2186 | S | S1.Spn11900ORF2148P (100% identity) | CRAANNNNNNNNCTG | S1.Spn11899III |
| 2187 | integrase/recombinase, phage integrase family | |||
| 2188 | S | S1.SpnsD39dORF10335P (100% identity) | S2.Spn11899IIIP | |
| 2189 | S | S1.Spn11899ORF2173P (58% identity) | S3.Spn11899IIIP | |
| 2190 | Uncharacterised protein | |||
| 515 | Uncharacterised protein | |||
| 516 | S | S4.Spn5610ORF520P (100% identity) | S3.Spn11899IVP | |
| 517 | integrase/recombinase, phage integrase family | |||
| 518 | S | S2.SpnsD39dORF10335P (100% identity) | S2.Spn11899IVP | |
| 519 | S | S2.SpnTORF544P (99% identity) | CRAANNNNNNNNCTT | S1.Spn11899IV |
| 520 | M | M.Spnp5ORF4640P (100% identity) | CRAANNNNNNNNCTT | M.Spn11899IV |
| 521 | R | Spn6A10ORF508P (100% identity) | CRAANNNNNNNNCTT | Spn11899IVP |
| 522 | Protein of uncharacterised function (DUF2812) | |||
| 863 | carbamoylphosphate synthase large subunit | |||
| 864 | M | M.SpnsD39dORF3010P (100% identity) | M.Spn11899ORF864P | |
| 865 | S | S1.Spn11889IIIP (100% identity) | S1.Spn11899ORF864P | |
| 866 | S | S2.Spn71ORFBP (53% identity) | S2.Spn11899ORF864P | |
| 867 | S | S1.Spn6A10ORF855P (36% identity) | S3.Spn11899ORF864P | |
| 868 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 869 | prophage maintenance system killer protein | |||
| 870 | integrase/recombinase, phage integrase family | |||
| 871 | S | S3.Spn11901ORF849P (89% identity) | S4.Spn11899ORF864P | |
| 872 | R | SpnPF1ORF8420P (100% identity) | Spn11899ORF864P | |
| 873 | arginine repressor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 916 | tetrapyrrole methylase | |||
| 917 | M | M1.SpnSP6ORF6095P (100% identity) | M1.Spn11899ORF917P | |
| 918 | R | SpnSP6ORF6095P (100% identity) | Spn11899ORF917P | |
| 919 | M | M2.SpnPKMM4ORFAP (100% identity) | M2.Spn11899ORF917P | |
| 920 | protein kinase | |||
| 1353 | U32 family peptidase | |||
| ??? | R | SpnRx1ORF6295P (100% identity) | TCTAGA | Spn11899IP |
| 1356 | M | M.SpnsD39dORF4195P (100% identity) | TCTAGA | M.Spn11899I |
| 1357 | AraC family transcriptional regulator | |||
| 1726 | dpnD protein | |||
| 1727 | R | SpnsD39dORF3910P (100% identity) | GATC | Spn11899ORF1727P |
| 1728 | thioesterase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1193 | GMP reductase | |||
| 1194 | R | Spn1947McrCP (100% identity) | Spn11899McrCP | |
| 1195 | R | Spn11889McrBP (100% identity) | Spn11899McrBP | |
| 1196 | translation factor | |||