Streptococcus pneumoniae NCTC11895 |
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Putative Streptococcus pneumoniae NCTC11895 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,210,930 bp
GenBank #: UHGU00000000 (NZ_UHGU00000000)
REBASE acronym: Spn11895
Org_num: 42721
All begin NCTC11895_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | SpnGA22FORFBP (34% identity) | Spn11895ORF4P | |
| 3 | type I restriction-modification system M | |||
| ??? | M | M.Spn11891ORF2243P (61% identity) | M.Spn11895ORF4P | |
| 6 | S | S1.SpnRIII (56% identity) | S1.Spn11895ORF4P | |
| 7 | S | S1.SpnRx1ORF2240P (41% identity) | S2.Spn11895ORF4P | |
| ??? | S | S3.Spnd6c8ORF494P (43% identity) | S3.Spn11895ORF4P | |
| ??? | S | S4.SpnSWU02ORFDP (20% identity) | S4.Spn11895ORF4P | |
| 8 | integrase/recombinase, phage integrase family | |||
| 2232 | type I restriction-modification system M | |||
| 2233 | M | M.Sps7493ORF8970P (61% identity) | M.Spn11895ORF2233P | |
| 2234 | S | S1.Spn12140IVP (85% identity) | S1.Spn11895ORF2233P | |
| 2235 | S | S1.Spns521I (32% identity) | S2.Spn11895ORF2233P | |
| 2236 | Uncharacterised protein | |||
| 2237 | integrase/recombinase, phage integrase family | |||
| 2238 | S | S4.Spnd6c8ORF494P (47% identity) | S3.Spn11895ORF2233P | |
| 2239 | Uncharacterised protein | |||
| ??? | R | Spn11895VIP (99% identity) | CRAANNNNNNNNCTT | Spn11895IP |
| 2293 | M | M.Sps7493ORF8970P (100% identity) | CRAANNNNNNNNCTT | M.Spn11895I |
| 2294 | type I restriction-modification system S | |||
| 2295 | integrase/recombinase, phage integrase family | |||
| 2296 | S | S1.SpnsD39dORF10335P (100% identity) | S2.Spn11895IP | |
| 2297 | S | S3.Spn43265ORF1360P (100% identity) | S3.Spn11895IP | |
| 2298 | Uncharacterised protein | |||
| 2293 | type I restriction-modification system M | |||
| 2294 | S | S1.SpnR36AORF2250P (100% identity) | CACNNNNNNNCTG | S.Spn11895IV |
| 2295 | integrase/recombinase, phage integrase family | |||
| 2276 | Uncharacterised protein | |||
| 2277 | R | SpnTORF544P (99% identity) | CRAANNNNNNNNCTK | Spn11895VIP |
| 2278 | M | M.Sps7493ORF8970P (100% identity) | CRAANNNNNNNNCTK | M.Spn11895VI |
| 2279 | S | S.SpnD39IIIC (100% identity) | CACNNNNNNNNTTC | S1.Spn11895VIP |
| 2280 | S | S1.SpnsD39dORF10335P (100% identity) | S2.Spn11895VIP | |
| 2281 | integrase/recombinase, phage integrase family | |||
| 2282 | S | S1.SpnD39VORF453P (100% identity) | CRAANNNNNNNNCTK | S3.Spn11895VI |
| 2283 | Uncharacterised protein | |||
| 2264 | carbamoylphosphate synthase large subunit | |||
| 2265 | M | M.SpnsD39dORF3010P (100% identity) | TCANNNNNNNTATC | M.Spn11895III |
| 2266 | type I restriction-modification system subunit | |||
| 2267 | S | S2.Spn1927ORF4290P (100% identity) | TCANNNNNNNTATC | S2.Spn11895III |
| 2268 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 2220 | integrase/recombinase, phage integrase family | |||
| 2221 | type I site-specific deoxyribonuclease chain S | |||
| 2265 | type I restriction modification enzyme methylase | |||
| 2266 | S | S1.Spn1927ORF4290P (99% identity) | TGANNNNNNRTAC | S.Spn11895V |
| 2267 | type I RM modification enzyme | |||
| 2248 | Uncharacterised protein | |||
| 2249 | S | S3.Spn43265ORF1360P (100% identity) | S3.Spn11895IP | |
| 2250 | integrase/recombinase, phage integrase family | |||
| 2251 | S | S1.SpnsD39dORF10335P (100% identity) | S2.Spn11895IP | |
| 2252 | type I restriction-modification system S | |||
| 2253 | M | M.Sps7493ORF8970P (100% identity) | CRAANNNNNNNNCTT | M.Spn11895I |
| 2254 | R | Spn11895VIP (99% identity) | CRAANNNNNNNNCTT | Spn11895IP |
| 2255 | Uncharacterised protein | |||
| 2251 | type I restriction-modification system | |||
| 2252 | S | S1.SpnR36AORF2250P (100% identity) | CACNNNNNNNCTG | S.Spn11895IV |
| 2253 | type I restriction-modification system M | |||
| 371 | carbamoylphosphate synthase large subunit | |||
| 372 | M | M.SpnsD39dORF3010P (100% identity) | TCANNNNNNNTATC | M.Spn11895III |
| 373 | type I restriction-modification system subunit | |||
| 374 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 375 | prophage maintenance system killer protein | |||
| 376 | integrase/recombinase, phage integrase family | |||
| 377 | S | S2.Spn1927ORF4290P (100% identity) | TCANNNNNNNTATC | S2.Spn11895III |
| 378 | R | Spn2562ORF749P (100% identity) | TCANNNNNNNTATC | Spn11895IIIP |
| 379 | chlorohydrolase | |||
| 372 | type I restriction modification enzyme methylase | |||
| 373 | S | S1.Spn1927ORF4290P (99% identity) | TGANNNNNNRTAC | S.Spn11895V |
| 374 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 2217 | Uncharacterised protein | |||
| 2218 | S | S3.SpnRIIIP (100% identity) | CACNNNNNNNNTTC | S.Spn11895ORF2218P |
| 2219 | type I restriction modification DNA specificity | |||
| 2220 | integrase/recombinase, phage integrase family | |||
| 2221 | S | S1.SpnD39VORF453P (100% identity) | CRAANNNNNNNNCTK | S3.Spn11895VI |
| 2222 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 891 | U32 family peptidase | |||
| ??? | R | Spn2562ORF1238P (100% identity) | TCTAGA | Spn11895IIP |
| 894 | M | M.Spns521III (100% identity) | TCTAGA | M.Spn11895II |
| 895 | AraC family transcriptional regulator | |||
| 1272 | dpnD protein | |||
| 1273 | R | SpnsD39dORF3910P (100% identity) | GATC | Spn11895ORF1273P |
| 1274 | thioesterase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 732 | GMP reductase | |||
| 733 | R | Spn8105McrCP (100% identity) | Spn11895McrCP | |
| 734 | R | SpnZGXMcrBP (100% identity) | Spn11895McrBP | |
| 735 | translation factor | |||