Streptococcus pneumoniae NCTC11891 |
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Putative Streptococcus pneumoniae NCTC11891 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,167,059 bp
GenBank #: UHHG00000000 (NZ_UHHG00000000)
REBASE acronym: Spn11891
Org_num: 42719
All begin NCTC11891_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7 | restriction modification system DNA specificity | |||
| 8 | S | S1.SpnPORF893P (100% identity) | GAYNNNNNNTATC | S1.Spn11891V |
| 9 | M | M.SpnsD39dORF3010P (100% identity) | GAYNNNNNNTATC | M.Spn11891V |
| 7 | S | S3.Spn6505ORF772P (100% identity) | TCANNNNNNRTAC | S.Spn11891VII |
| 8 | type I restriction-modification system subunit | |||
| 2252 | M | M.Ssa16RI (10% identity) | CACNNNNNNNNTTC | M.Spn11891II |
| 2253 | S | S3.SpnPORF531P (100% identity) | CACNNNNNNNNTTC | S.Spn11891II |
| 2254 | type I restriction enzyme | |||
| ??? | M | M.Spns521I (92% identity) | M.Spn11891ORF2243P | |
| ??? | S | S1.Spn1929ORFDP (99% identity) | S1.Spn11891ORF2243P | |
| 2248 | S | S1.SpnNP1ORF2970P (68% identity) | S2.Spn11891ORF2243P | |
| 2249 | S | S2.Spnd6c6ORF465P (100% identity) | S3.Spn11891ORF2243P | |
| 2250 | integrase/recombinase, phage integrase family | |||
| 2251 | S | S3.Spns521IP (100% identity) | S4.Spn11891ORF2243P | |
| ??? | M | M.Spns521I (98% identity) | M.Spn11891ORF25P | |
| 29 | S | S1.Ssa058ORF1455P (45% identity) | S1.Spn11891ORF25P | |
| 30 | S | S7.Spn381ORF170P (35% identity) | S2.Spn11891ORF25P | |
| ??? | S | S.Sps7493ORF8970P (26% identity) | S3.Spn11891ORF25P | |
| 31 | S | S3.SpnBHN97II (18% identity) | S4.Spn11891ORF25P | |
| ??? | S | S4.Spnd6c8ORF494P (14% identity) | S5.Spn11891ORF25P | |
| ??? | S | S4.Spnd6c8ORF494P (18% identity) | S6.Spn11891ORF25P | |
| 32 | integrase/recombinase, phage integrase family | |||
| 33 | integrase/recombinase, phage integrase family | |||
| 34 | S | S2.Spnd6c6ORF465P (100% identity) | S7.Spn11891ORF25P | |
| 35 | S | S3.Spn2629ORF487P (98% identity) | S8.Spn11891ORF25P | |
| 36 | Uncharacterised protein | |||
| 42 | integrase/recombinase, phage integrase family | |||
| 43 | S | S3.Spns521IP (100% identity) | S.Spn11891ORF43P | |
| 44 | Uncharacterised protein | |||
| 3 | integrase/recombinase, phage integrase family | |||
| 4 | S | S4.Spn6635ORF543P (100% identity) | S.Spn11891ORF4P | |
| 5 | Uncharacterised protein | |||
| 16 | restriction endonuclease S subunit | |||
| 17 | S | S2.Spn11902ORF480P (97% identity) | S3.Spn11891IP | |
| 18 | S | S2.Spns521I (90% identity) | S2.Spn11891IP | |
| 19 | integrase/recombinase, phage integrase family | |||
| 20 | S | S1.SpnST62ORF4110P (100% identity) | CACNNNNNNNCTG | S1.Spn11891I |
| 21 | M | M.Spns521I (100% identity) | CACNNNNNNNCTG | M.Spn11891I |
| ??? | R | SpnSV36ORF4P (99% identity) | CACNNNNNNNCTG | Spn11891IP |
| 24 | heat-inducible transcription repressor | |||
| 1279 | carbamoylphosphate synthase large subunit | |||
| 1280 | M | M.SpnsD39dORF3010P (100% identity) | GAYNNNNNNTATC | M.Spn11891V |
| 1281 | S | S1.SpnPORF893P (100% identity) | GAYNNNNNNTATC | S1.Spn11891V |
| 1282 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 1283 | prophage maintenance system killer protein | |||
| 1284 | integrase/recombinase, phage integrase family | |||
| 1285 | restriction modification system DNA specificity | |||
| 1286 | R | SpnN214ORF4780P (100% identity) | GAYNNNNNNTATC | Spn11891VP |
| 1287 | arginine repressor | |||
| 1284 | integrase/recombinase, phage integrase family | |||
| 1285 | S | S3.Spn6505ORF772P (100% identity) | TCANNNNNNRTAC | S.Spn11891VII |
| 1286 | type I restriction-modification system R | |||
| 2232 | Uncharacterised protein | |||
| 2233 | R | SpnSV36ORF4P (100% identity) | CRAANNNNNNNNNTTC | Spn11891IIIP |
| 2234 | M | M.Spns521I (100% identity) | CRAANNNNNNNNNTTC | M.Spn11891III |
| 2235 | S | S1.Spns521I (100% identity) | CRAANNNNNNNNNTTC | S.Spn11891III |
| 2236 | type I restriction enzyme | |||
| 2237 | integrase/recombinase, phage integrase family | |||
| 2238 | S | S1.Spnp5ORF4640P (100% identity) | CRAANNNNNNNNCTG | S.Spn11891ORF21P |
| 2239 | type I restriction-modification system M | |||
| 2238 | type I site-specific deoxyribonuclease chain S | |||
| 2239 | M | M.Spns521I (100% identity) | CACNNNNNNNCTG | M.Spn11891I |
| ??? | R | SpnSV36ORF4P (99% identity) | CACNNNNNNNCTG | Spn11891IP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 723 | single-strand binding protein | |||
| 724 | M | M.Spn47502ORF1705P (100% identity) | M.Spn11891ORF724P | |
| 725 | Uncharacterised protein | |||
| 726 | DNA-binding protein | |||
| 727 | M | M.Spn6635ORF1522P (100% identity) | M.Spn11891ORF727P | |
| 728 | phage protein | |||
| 1000 | thioesterase | |||
| 1001 | R | SpnsD39dORF3910P (100% identity) | GATC | Spn11891ORF1001P |
| 1002 | dpnD protein | |||
| 1578 | L-lactate dehydrogenase 1 | |||
| 1579 | RM | SpnsD39dORF4855BP (99% identity) | TCGAG | Spn11891IVB |
| 1580 | RM | Spn9165ORF1211AP (100% identity) | TCGAG | Spn11891IVA |
| 1581 | cytotoxic translational repressor of | |||
| 1781 | U32 family peptidase | |||
| ??? | R | SpnSV36ORF1263P (100% identity) | TCTAGA | Spn11891VIP |
| 1784 | M | M.Spns521III (100% identity) | TCTAGA | M.Spn11891VI |
| 1785 | AraC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1607 | GMP reductase | |||
| 1608 | R | Spn9165McrCP (97% identity) | Spn11891McrCP | |
| 1609 | R | Spn9165McrBP (100% identity) | Spn11891McrBP | |
| 1610 | translation factor | |||