Streptococcus pneumoniae NCTC11889 |
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Putative Streptococcus pneumoniae NCTC11889 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,153,156 bp
GenBank #: UHGQ00000000 (NZ_UHGQ00000000)
REBASE acronym: Spn11889
Org_num: 42717
All begin NCTC11889_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4 | Protein of uncharacterised function (DUF2812) | |||
| 5 | R | Spn6A10ORF508P (100% identity) | CRAANNNNNNNNNTTC | Spn11889IIP |
| 6 | M | M.Spnp5ORF4640P (100% identity) | CRAANNNNNNNNNTTC | M.Spn11889II |
| 7 | S | S1.Spn41ORFCP (100% identity) | CRAANNNNNNNNNTTC | S.Spn11889II |
| 8 | type I restriction enzyme | |||
| 2225 | Uncharacterised protein | |||
| 2226 | S | S3.SpnRIIIP (100% identity) | CACNNNNNNNNTTC | S3.Spn11889ORF2230P |
| 2227 | S | S1.SpnsD39dORF10335P (100% identity) | S2.Spn11889ORF2230P | |
| 2228 | integrase/recombinase, phage integrase family | |||
| 2229 | S | S1.Spn11900ORF2148P (100% identity) | CRAANNNNNNNNCTG | S1.Spn11889ORF2230P |
| 2230 | M | M.Spnp5ORF4640P (100% identity) | M.Spn11889ORF2230P | |
| 2231 | R | Spn6A10ORF508P (100% identity) | Spn11889ORF2230P | |
| 2232 | Protein of uncharacterised function (DUF2812) | |||
| 2209 | Uncharacterised protein | |||
| 2210 | S | S4.Spn5610ORF520P (100% identity) | S3.Spn11889ORF2214P | |
| 2211 | integrase/recombinase, phage integrase family | |||
| 2212 | S | S1.SpnsD39dORF10335P (100% identity) | S2.Spn11889ORF2214P | |
| 2213 | S | S1.Spn8854ORF458P (100% identity) | CRAANNNNNNNNCTT | S1.Spn11889ORF2214P |
| 2214 | M | M.Spnp5ORF4640P (100% identity) | M.Spn11889ORF2214P | |
| 2215 | R | Spn6A10ORF508P (100% identity) | Spn11889ORF2214P | |
| 2216 | Protein of uncharacterised function (DUF2812) | |||
| 7 | type I restriction-modification system, S | |||
| 8 | S | S1.SpnsD39dORF10335P (100% identity) | S2.Spn11889ORF2214P | |
| 9 | integrase/recombinase, phage integrase family | |||
| 10 | S | S1.Spn8854ORF458P (100% identity) | CRAANNNNNNNNCTT | S1.Spn11889ORF2214P |
| 11 | M | M.Spnp5ORF4640P (100% identity) | M.Spn11889ORF2214P | |
| 12 | R | Spn6A10ORF508P (100% identity) | Spn11889ORF2214P | |
| 13 | Protein of uncharacterised function (DUF2812) | |||
| 2198 | carbamoylphosphate synthase large subunit | |||
| 2199 | M | M.SpnsD39dORF3010P (100% identity) | GAYNNNNNNTATC | M.Spn11889ORF2199P |
| 2200 | S | S1.SpnXen35ORF4400P (99% identity) | GAYNNNNNNTATC | S.Spn11889ORF2199P |
| 2201 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 354 | carbamoylphosphate synthase large subunit | |||
| 355 | M | M.SpnsD39dORF3010P (100% identity) | GAYNNNNNNTATC | M.Spn11889III |
| 356 | S | S1.Spn11899ORF864P (100% identity) | S1.Spn11889IIIP | |
| 357 | S | S2.Spn97ORF8600P (99% identity) | GAYNNNNNNTATC | S2.Spn11889III |
| 358 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 359 | prophage maintenance system killer protein | |||
| 360 | integrase/recombinase, phage integrase family | |||
| 361 | S | S3.Spn97ORF8600P (100% identity) | S3.Spn11889IIIP | |
| 362 | R | SpnPF1ORF8420P (100% identity) | GAYNNNNNNTATC | Spn11889IIIP |
| 363 | arginine repressor | |||
| 2174 | Uncharacterised protein | |||
| 2175 | S | S4.Spn5610ORF520P (100% identity) | S4.Spn11889ORF2180P | |
| 2176 | integrase/recombinase, phage integrase family | |||
| 2177 | S | S1.SpnsD39dORF10335P (100% identity) | S3.Spn11889ORF2180P | |
| 2178 | S | S1.SpnRx1ORF2240P (45% identity) | S2.Spn11889ORF2180P | |
| 2179 | S | S1.SpnXen35ORF2555P (22% identity) | S1.Spn11889ORF2180P | |
| ??? | M | M.Spnp5ORF4640P (100% identity) | M.Spn11889ORF2180P | |
| ??? | R | Spn11895VIP (95% identity) | Spn11889ORF2180P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 406 | tetrapyrrole methylase | |||
| 407 | M | M1.SpnSP6ORF6095P (100% identity) | M1.Spn11889ORF407P | |
| 408 | R | SpnSP6ORF6095P (100% identity) | Spn11889ORF407P | |
| 409 | M | M2.SpnPKMM4ORFAP (100% identity) | M2.Spn11889ORF407P | |
| 410 | protein kinase | |||
| 842 | U32 family peptidase | |||
| ??? | R | SpnRx1ORF6295P (100% identity) | TCTAGA | Spn11889IP |
| 845 | M | M.SpnsD39dORF4195P (100% identity) | TCTAGA | M.Spn11889I |
| 846 | AraC family transcriptional regulator | |||
| 1215 | dpnD protein | |||
| 1216 | R | SpnsD39dORF3910P (100% identity) | GATC | Spn11889ORF1216P |
| 1217 | thioesterase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 683 | GMP reductase | |||
| 684 | R | Spn1947McrCP (100% identity) | Spn11889McrCP | |
| 685 | R | Spn11899McrBP (100% identity) | Spn11889McrBP | |
| 686 | translation factor | |||