Staphylococcus schleiferi NCTC12218 |
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Putative Staphylococcus schleiferi NCTC12218 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
| Sequence length: | GenBank #: | |
| Chromosome: | (contig set) | UHEF00000000 |
| chromosome 1: | 2,522,243 bp | LR962863 |
REBASE acronym: Ssc12218
Org_num: 42605
All begin NCTC12218_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 123 | membrane protein | |||
| 124 | R | Ssc6176ORF580P (99% identity) | AGGNNNNNGTA | Ssc12218IIIP |
| 125 | Uncharacterised protein | |||
| ??? | M | M.Ssc6184ORF580P (100% identity) | AGGNNNNNGTA | M.Ssc12218III |
| 129 | S | S1.Ssc6184ORF580P (63% identity) | AGGNNNNNGTA | S1.Ssc12218IIIP |
| 130 | S | S.Sflch3ORF600P (34% identity) | AGGNNNNNGTA | S2.Ssc12218IIIP |
| 131 | Protein of uncharacterised function (DUF2812) | |||
| 2726 | Uncharacterised protein | |||
| 2727 | R | SausN4ORF6575P (100% identity) | Ssc12218ORF2727P | |
| 2728 | SepS16A | |||
| 2959 | superantigen-like protein, exotoxin 14 | |||
| 2960 | M | M.SausN4ORF5385P (100% identity) | GWAGNNNNNGAT | M.Ssc12218II |
| 2961 | S | S.SausN4ORF5385P (100% identity) | GWAGNNNNNGAT | S.Ssc12218II |
| 2962 | exotoxin | |||
| 4477 | KAP family P-loop domain | |||
| 4478 | S | S.SausN4ORF11885P (100% identity) | GGANNNNNNNTCG | S.Ssc12218I |
| 4479 | M | M.SausN4ORF11885P (100% identity) | GGANNNNNNNTCG | M.Ssc12218I |
| 4480 | Serine protease splD | |||
| chromosome 1 | ||||
| 123 | membrane protein | |||
| 124 | R | Ssc6176ORF580P (99% identity) | AGGNNNNNGTA | Ssc12218IIIP |
| 125 | Uncharacterised protein | |||
| ??? | M | M.Ssc6184ORF580P (100% identity) | AGGNNNNNGTA | M.Ssc12218III |
| 129 | S | S1.Ssc6184ORF580P (63% identity) | AGGNNNNNGTA | S1.Ssc12218IIIP |
| 130 | S | S.Sflch3ORF600P (34% identity) | AGGNNNNNGTA | S2.Ssc12218IIIP |
| 131 | Protein of uncharacterised function (DUF2812) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 34 | rRNA large subunit methyltransferase | |||
| 35 | R | Sflch3ORF165P (99% identity) | Ssc12218ORF36P | |
| ??? | M | M.Sflch3ORF165P (100% identity) | M.Ssc12218ORF36P | |
| 38 | Uncharacterised protein | |||
| 38 | Uncharacterised protein | |||
| ??? | R | Sfl682DptFP (100% identity) | Ssc12218DptFP | |
| ??? | hypothetical protein | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptF | |||
| ??? | R | Sflch3DptGP (99% identity) | Ssc12218DptGP | |
| 42 | Type IV secretory pathway, VirB4 components | |||
| ??? | hypothetical protein | |||
| 42 | R | Sfl682DptHP (99% identity) | Ssc12218DptHP | |
| 43 | membrane protein | |||
| chromosome 1 | ||||
| 34 | rRNA large subunit methyltransferase | |||
| 35 | R | Sflch3ORF165P (99% identity) | Ssc12218ORF36P | |
| ??? | M | M.Sflch3ORF165P (100% identity) | M.Ssc12218ORF36P | |
| 38 | Uncharacterised protein | |||
| 38 | Uncharacterised protein | |||
| ??? | R | Sfl682DptFP (100% identity) | Ssc12218DptFP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptF | |||
| ??? | R | Sflch3DptGP (99% identity) | Ssc12218DptGP | |
| 42 | Type IV secretory pathway, VirB4 components | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| 42 | R | Sfl682DptHP (99% identity) | Ssc12218DptHP | |
| 43 | membrane protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2614 | Uncharacterised protein | |||
| 2615 | R | Sauu102McrBP (100% identity) | Ssc12218McrBP | |
| 2616 | R | Sauu102McrCP (100% identity) | Ssc12218McrCP | |
| 2617 | Uncharacterised protein | |||
| 5162 | lipoprotein | |||
| 5163 | R | SausN4ORF8435P (100% identity) | SCNGS | Ssc12218ORF5163P |
| 5164 | 7,8-dihydro-8-oxoguanine-triphosphatase | |||