Shigella flexneri NCTC2 |
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Putative Shigella flexneri NCTC2 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,656,047 bp
GenBank #: UGYS00000000 (NZ_UGYS00000000)
REBASE acronym: SflNCTC2
Org_num: 42371
All begin NCTC2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 690 | Uncharacterized conserved protein | |||
| 692 | S | S.SflPE577ORF23095P (100% identity) | GTANNNNNNNNGTCY | S.SflNCTC2I |
| 693 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.SflNCTC2I |
| 694 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | SflNCTC2IP |
| 695 | IS1 ORF2 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1092 | PerC transcriptional activator | |||
| 1093 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.SflNCTC2ORF1093P |
| 1094 | LexA repressor | |||
| 1152 | Protein ninB | |||
| 1153 | M | M.EcoACNORF2457P (99% identity) | GATC | M.SflNCTC2ORF1153P |
| 1154 | Protein of uncharacterised function (DUF2591) | |||
| 3008 | transmembrane subunit | |||
| 3009 | V | V.SflTDcmP (100% identity) | V.SflNCTC2DcmP | |
| 3010 | M | M.SflTDcmP (100% identity) | CCWGG | M.SflNCTC2DcmP |
| 3011 | HD superfamily hydrolase | |||
| 4374 | DNA-binding protein Fis | |||
| 4375 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.SflNCTC2ORF4375P |
| 4376 | Protein of uncharacterised function (DUF2556) | |||
| 4487 | ribulose-phosphate 3-epimerase | |||
| 4488 | M | M.SflTDamP (100% identity) | GATC | M.SflNCTC2DamP |
| 4489 | cell division protein DamX | |||