Shigella dysenteriae NCTC11868 |
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Putative Shigella dysenteriae NCTC11868 RM systems
Ref:
REBASE ref # 22501
Contig set: 4,891,748 bp
GenBank #: UYIT00000000 (NZ_UYIT00000000)
REBASE acronym: Sdy11868
Org_num: 42367
All begin NCTC11868_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1706 | phage-like protein | |||
| 1707 | S | S.SboBSORF4809P (99% identity) | GGANNNNNNCTTT | S.Sdy11868I |
| 1708 | M | M.Sso30807I (100% identity) | GGANNNNNNCTTT | M.Sdy11868I |
| 1709 | R | Sso30807IP (100% identity) | GGANNNNNNCTTT | Sdy11868IP |
| 1710 | IS600 ORF1 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4237 | endonuclease | |||
| ??? | M | M.Sso30807ORF12365P (100% identity) | M.Sdy11868ORF4238P | |
| 4239 | IS911 orfA | |||
| 38 | transmembrane subunit | |||
| 39 | V | V.SsoST152DcmP (100% identity) | V.Sdy11868Dcm2P | |
| 40 | M | M.Sso30807Dcm (75% identity) | M.Sdy11868Dcm2P | |
| 76 | endonuclease | |||
| ??? | M | M.Sso30807ORF12365P (100% identity) | M.Sdy11868ORF4238P | |
| 78 | IS911 orfA | |||
| 528 | DNA-binding protein Fis | |||
| 529 | M | M.Sso30807ORF1465P (100% identity) | ATGCAT | M.Sdy11868ORF529P |
| 530 | Protein of uncharacterised function (DUF2556) | |||
| 4762 | bacteriophage protein | |||
| 4763 | M | M.Sso30807ORF15405P (100% identity) | A | M.Sdy11868ORF4763P |
| 4768 | Enhancing lycopene biosynthesis protein 1 | |||
| 648 | ribulose-phosphate 3-epimerase | |||
| 649 | M | M.Sso30807DamP (100% identity) | GATC | M.Sdy11868DamP |
| 650 | cell division protein DamX | |||
| 3778 | hydrolase | |||
| 3779 | M | M.Sso30807Dcm (100% identity) | CCWGG | M.Sdy11868DcmP |
| 3780 | V | V.SsoST152DcmP (100% identity) | V.Sdy11868DcmP | |
| 3781 | transmembrane subunit | |||
| 3896 | PerC transcriptional activator | |||
| 3897 | M | M.Sso30807ORF19320P (100% identity) | GATC | M.Sdy11868ORF3897P |
| 3898 | crossover junction endodeoxyribonuclease RusA | |||
| 3472 | bacteriophage protein | |||
| 3473 | M | M.Sso30807ORF21255P (100% identity) | A | M.Sdy11868ORF3903P |
| 3478 | YjhS | |||
| 2268 | LexA repressor | |||
| 2269 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sdy11868ORF2269P |
| 2270 | PerC transcriptional activator | |||