Shigella boydii NCTC8576 |
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Putative Shigella boydii NCTC8576 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,005,414 bp
GenBank #: UAUR00000000 (NZ_UAUR00000000)
REBASE acronym: Sbo8576
Org_num: 42366
All begin NCTC8576_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1053 | phage-like protein | |||
| 1054 | S | S.SboBSORF4809P (100% identity) | GGANNNNNNCTTT | S.Sbo8576I |
| 1055 | M | M.Sso30807I (100% identity) | GGANNNNNNCTTT | M.Sbo8576I |
| 1056 | R | Sdy9764IP (100% identity) | GGANNNNNNCTTT | Sbo8576IP |
| 1057 | IS1 ORF2 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5465 | Uncharacterised protein | |||
| 5466 | M | M.Sso866ORF27155P (100% identity) | M.Sbo8576ORF5466P | |
| 5467 | Protein of uncharacterised function (DUF1281) | |||
| 4271 | Enhancing lycopene biosynthesis protein 1 | |||
| 4276 | M | M.SboBSORF1263P (100% identity) | A | M.Sbo8576ORF4276P |
| 4277 | bacteriophage protein | |||
| 3556 | YjhS | |||
| 3561 | M | M.Sdy9764ORFHP (100% identity) | A | M.Sbo8576ORF3561P |
| 3562 | bacteriophage protein | |||
| 3566 | crossover junction endodeoxyribonuclease RusA | |||
| 3567 | M | M.Sso30807ORF19320P (100% identity) | GATC | M.Sbo8576ORF3567P |
| 3568 | PerC transcriptional activator | |||
| 3605 | YjhS | |||
| 3610 | M | M.Sdy9764ORFAP (100% identity) | M.Sbo8576ORF3610P | |
| 3611 | insertion sequence 2 OrfA protein | |||
| 4625 | transmembrane subunit | |||
| 4626 | V | V.SsoST152DcmP (100% identity) | V.Sbo8576DcmP | |
| 4627 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Sbo8576DcmP |
| 4628 | hydrolase | |||
| 914 | YjhS | |||
| 919 | M | M.Eal53106ORFLP (96% identity) | A | M.Sbo8576ORF919P |
| 920 | bacteriophage protein | |||
| 926 | LexA repressor | |||
| 927 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Sbo8576ORF927P |
| 928 | PerC transcriptional activator | |||
| 1920 | DNA-binding protein Fis | |||
| 1921 | M | M.Sfl714ORF2095P (100% identity) | ATGCAT | M.Sbo8576ORF1921P |
| 1922 | Protein of uncharacterised function (DUF2556) | |||
| 2053 | ribulose-phosphate 3-epimerase | |||
| 2054 | M | M.UbaC1152DamP (100% identity) | GATC | M.Sbo8576DamP |
| 2055 | cell division protein DamX | |||