Salmonella enterica subsp. enterica NCTC8256 |
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Putative Salmonella enterica subsp. enterica NCTC8256 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
GenBank #: UGXR00000000
REBASE acronym: Sen8256
Org_num: 42324
All begin NCTC8256_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 129 | TIR protein | |||
| 130 | M | M.Sen96141ORF490P (100% identity) | GGGANNNNNNTAC | M.Sen8256II |
| ??? | S | S.Sen96141ORF490P (51% identity) | GGGANNNNNNTAC | S1.Sen8256II |
| 131 | S | S.Sen7675ORF22260P (71% identity) | GGGANNNNNNTAC | S2.Sen8256II |
| 132 | membrane protein | |||
| ??? | R | Sen96141ORF490P (99% identity) | GGGANNNNNNTAC | Sen8256IIP |
| 136 | 5-nucleotidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 498 | DamX protein | |||
| ??? | M | M.StyTDamP (100% identity) | GATC | M.Sen8256DamP |
| 501 | ribulose-phosphate 3-epimerase | |||
| 1495 | C4-type zinc finger protein, DksA/TraR family | |||
| 1496 | M | M.SenS334ORF5985P (100% identity) | M.Sen8256ORF1496P | |
| 1497 | Bacteriophage replication gene A protein (GPA) | |||
| 1746 | integrase | |||
| ??? | M | M.SenRM018ORF6200P (99% identity) | M.Sen8256ORF1747P | |
| 1749 | Uncharacterised protein | |||
| 1758 | Uncharacterised protein | |||
| 1759 | M | M.SenM4441ORF6385P (100% identity) | M.Sen8256ORF1759P | |
| 1760 | Primosomal protein I | |||
| 1949 | Uncharacterised protein | |||
| 1950 | M | M1.SenRM074ORF7060P (100% identity) | M1.Sen8256ORF1950P | |
| 1951 | bacteriophage protein | |||
| 1952 | M | M2.SenRM074ORF7060P (100% identity) | M2.Sen8256ORF1950P | |
| 1953 | Uncharacterised protein | |||
| 2439 | bacteriophage protein | |||
| 2440 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen8256ORF2440P |
| 2441 | Integration, recombination (Phage or Prophage) | |||
| 2608 | metal-dependent phospho hydrolase | |||
| ??? | M | M.SenH3DcmP (97% identity) | CCWGG | M.Sen8256DcmP |
| 2612 | V | V.Sen96141DcmP (100% identity) | V.Sen8256DcmP | |
| 2613 | inner membrane transporter yedA | |||
| 5392 | Uncharacterised protein | |||
| 5393 | R | Sen96141ORF19960P (100% identity) | Sen8256ORF5393P | |
| 5394 | metallothiol transferase FosB | |||
| 5406 | Uncharacterised protein | |||
| ??? | RM | Sen96141ORF19990P (99% identity) | GAAAYTC | Sen8256ORF5407P |
| 5411 | ATP-dependent helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4738 | cytoplasmic protein | |||
| 4739 | R | SenMAC15ORF19070P (100% identity) | CAGAG | Sen8256IP |
| 4740 | M | M.Sen96141ORF17545P (100% identity) | CAGAG | M.Sen8256I |
| 4741 | metabolite transport protein | |||