Salmonella enterica NCTC6020 |
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Putative Salmonella enterica NCTC6020 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,807,729 bp
GenBank #: UGWC00000000 (NZ_UGWC00000000)
REBASE acronym: Sen6020
Org_num: 42289
All begin NCTC6020_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3896 | Uncharacterised protein | |||
| 3897 | S | S.EclEn37ORF5060P (86% identity) | AAAYNNNNNGTTC | S.Sen6020III |
| 3898 | M | M.Sen24770ORF1870P (97% identity) | AAAYNNNNNGTTC | M.Sen6020III |
| 3899 | R | SenST350ORF17650P (99% identity) | AAAYNNNNNGTTC | Sen6020IIIP |
| 3900 | prophage protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 257 | possible endonuclease | |||
| 258 | M | M.EcoY2019ORF6685P (100% identity) | GATC | M.Sen6020ORF258P |
| 259 | C4-type zinc finger protein, DksA/TraR family | |||
| 57 | yfaB | |||
| 58 | M | M.SflN101ORF24625P (100% identity) | M.Sen6020ORF58P | |
| 59 | Uncharacterized protein yubE | |||
| 178 | Uncharacterised protein | |||
| 182 | M | M.Sen94620ORF28085P (99% identity) | M.Sen6020ORF182P | |
| 183 | recombination associated protein | |||
| 1556 | inner membrane transporter yedA | |||
| 1557 | V | V.StyUK1DcmP (100% identity) | V.Sen6020DcmP | |
| 1558 | M | M.Sen2017DcmP (100% identity) | CCWGG | M.Sen6020DcmP |
| 1559 | metal-dependent phospho hydrolase | |||
| 2857 | Fis DNA-binding protein | |||
| 2858 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen6020II |
| 2859 | protein yhdU | |||
| 2956 | ribulose-phosphate 3-epimerase | |||
| 2957 | M | M.StyTDamP (100% identity) | GATC | M.Sen6020DamP |
| 2958 | DamX protein | |||
| 3892 | integrase | |||
| 3893 | R | SenS546ORF19500P (100% identity) | GAAC | Sen6020ORF3893P |
| 3894 | 5-nucleotidase | |||
| 3914 | Uncharacterised protein | |||
| 3915 | R | SenM4441ORF18165P (100% identity) | Sen6020ORF3915P | |
| 3916 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4372 | metabolite transport protein | |||
| 4373 | M | M.Ssp15303ORFGP (100% identity) | CAGAG | M.Sen6020I |
| 4374 | R | SenS334ORF18010P (99% identity) | CAGAG | Sen6020IP |
| 4375 | cytoplasmic protein | |||