Salmonella enterica NCTC5785 |
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Putative Salmonella enterica NCTC5785 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,749,583 bp
GenBank #: UGVU00000000 (NZ_UGVU00000000)
REBASE acronym: Sen5785
Org_num: 42282
All begin NCTC5785_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3844 | restriction endonuclease | |||
| 3845 | R | SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | Sen5785ORF3846P |
| 3846 | M | M.SenNCTR462ORF2380P (99% identity) | CCANNNNNNNNTGAG | M.Sen5785ORF3846P |
| 3847 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.Sen5785ORF3846P |
| 3849 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4582 | Uncharacterized protein yubE | |||
| 4583 | M | M.Sso80ORF24890P (99% identity) | M.Sen5785ORF4583P | |
| 4584 | yfaB | |||
| 361 | DamX protein | |||
| 362 | M | M.StyTDamP (100% identity) | GATC | M.Sen5785Dam |
| 363 | ribulose-phosphate 3-epimerase | |||
| 460 | protein yhdU | |||
| 461 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5785ORF461P |
| 462 | Fis DNA-binding protein | |||
| 1255 | Uncharacterised protein | |||
| ??? | M | M.SenM4441ORF6385P (100% identity) | M.Sen5785ORF1256P | |
| 1257 | Primosomal protein I | |||
| 1816 | metal-dependent phospho hydrolase | |||
| 1817 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.Sen5785DcmP |
| 1818 | V | V.StyUK1DcmP (100% identity) | V.Sen5785DcmP | |
| 1819 | inner membrane transporter yedA | |||
| 3874 | Uncharacterised protein | |||
| 3875 | R | Sens24219ORF19960P (100% identity) | Sen5785ORF3875P | |
| 3876 | RES domain | |||
| 3879 | Uncharacterised protein | |||
| 3880 | M | M.SenAnaIV (100% identity) | CCWWGG | M.Sen5785II |
| 3881 | R | SenAnaIVP (93% identity) | CCWWGG | Sen5785IIP |
| 3882 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3403 | cytoplasmic protein | |||
| 3404 | R | SenNCTR462ORF9180P (99% identity) | CAGAG | Sen5785IP |
| 3405 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen5785I |
| 3406 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3843 | membrane protein | |||
| 3844 | R | SenNCTR462MrrP (100% identity) | Sen5785MrrP | |
| 3845 | type I restriction enzyme EcoKI subunit R | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1244 | phage integrase (pseudogene) | |||
| 1245 | M | M.SenRM018ORF6200P (100% identity) | M.Sen5785ORF1245P | |
| 1246 | Uncharacterised protein | |||