Salmonella enterica NCTC12705 |
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Putative Salmonella enterica NCTC12705 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,917,039 bp
GenBank #: UGVW00000000 (NZ_UGVW00000000)
REBASE acronym: Sen12705
Org_num: 42279
All begin NCTC12705_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4075 | restriction endonuclease | |||
| 4076 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen12705IIP |
| 4077 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen12705II |
| 4078 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen12705II |
| 4080 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4787 | Uncharacterized protein yubE | |||
| 4788 | M | M.SenPS6ORF23695P (99% identity) | SAY | M.Sen12705ORF4788P |
| 4789 | yfaB | |||
| 366 | DamX protein | |||
| 367 | M | M.StyTDamP (100% identity) | M.Sen12705DamP | |
| 368 | ribulose-phosphate 3-epimerase | |||
| 510 | protein yhdU | |||
| 511 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen12705III |
| 512 | Fis DNA-binding protein | |||
| 1911 | metal-dependent phospho hydrolase | |||
| 1912 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen12705DcmP |
| 1913 | V | V.StyTDcmP (100% identity) | V.Sen12705DcmP | |
| 1914 | inner membrane transporter yedA | |||
| 4106 | Uncharacterised protein | |||
| 4107 | R | Sens12373ORF19550P (100% identity) | Sen12705ORF4107P | |
| 4108 | metallothiol transferase FosB | |||
| 4112 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen12705ORF4112P |
| 4113 | ATP-dependent helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3545 | cytoplasmic protein | |||
| 3546 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen12705IP |
| 3547 | M | M.SenC2217ORF18390P (100% identity) | CAGAG | M.Sen12705I |
| 3548 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4074 | membrane protein | |||
| 4075 | R | StyUK1MrrP (100% identity) | Sen12705MrrP | |
| 4076 | type I restriction enzyme EcoKI subunit R | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1204 | C4-type zinc finger protein, DksA/TraR family | |||
| 1205 | M | M.StyLTORF13745P (100% identity) | M.Sen12705ORF1205P | |
| 1206 | Bacteriophage replication gene A protein (GPA) | |||