Rhodococcus rhodochrous NCTC630 |
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Putative Rhodococcus rhodochrous NCTC630 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 6,513,136 bp
GenBank #: UGVK00000000 (NZ_UGVK00000000)
REBASE acronym: Rrh630
Org_num: 42269
All begin NCTC630_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2038 | beta-phosphoglucomutase/trehalose | |||
| 2040 | R | Nfa33949ORF28P (99% identity) | ACCNNNNNCTCC | Rrh630IIP |
| 2041 | Uncharacterised protein | |||
| ??? | restriction system protein | |||
| 2043 | S | S.MspHK90ORF21855P (58% identity) | ACCNNNNNCTCC | S.Rrh630II |
| 2044 | M | M.NfaORF27610P (96% identity) | ACCNNNNNCTCC | M.Rrh630II |
| 2045 | hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 469 | Z1 domain | |||
| 470 | M | M.Rho9431ORF17190P (49% identity) | M.Rrh630ORF470P | |
| 471 | cold shock protein | |||
| 1255 | Uncharacterised protein | |||
| 1256 | V | V.RtoFH232ORFDP (30% identity) | V.Rrh630ORF1258P | |
| 1257 | R | AspLS16ORF15690P (82% identity) | Rrh630ORF1258P | |
| 1258 | M | M.AspLS16ORF15690P (90% identity) | M.Rrh630ORF1258P | |
| 1259 | recombinase | |||
| 3378 | Uncharacterised protein | |||
| 3379 | M | M.NfaW6977ORF8695P (100% identity) | M.Rrh630ORF3379P | |
| 3380 | Protein of uncharacterised function (DUF732) | |||
| 3383 | helicase and type iii restriction enzyme | |||
| 3384 | RM | Nsp16ORF3320P (79% identity) | Rrh630ORF3384P | |
| 3385 | Uncharacterised protein | |||
| 3463 | tetr family transcriptional regulator | |||
| 3464 | M | M.Nfa469ORF5555P (99% identity) | ATCGAT | M.Rrh630I |
| 3465 | nitroreductase | |||
| 3750 | AIPR protein | |||
| 3751 | M | M.Ama008ORF12830P (66% identity) | M.Rrh630ORF3751P | |
| 3752 | S | S.Msp1947ORF6475P (59% identity) | S.Rrh630ORF3751P | |
| 3753 | protein kinase/ LuxR family transcriptional | |||
| 4852 | Uncharacterized protein conserved in bacteria | |||
| 4853 | M | M.NfaORF2340P (98% identity) | M.Rrh630ORF4853P | |
| 4854 | V | V.NfaW6977ORF16235P (100% identity) | V.Rrh630ORF4853P | |
| 4855 | 218 aa hypothetical membrane protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2041 | Uncharacterised protein | |||
| ??? | R | NfaMrrP (98% identity) | Rrh630MrrP | |
| 2043 | Type I restriction enzyme EcoKI specificity | |||