Pseudomonas oleovorans NCTC10860 |
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Putative Pseudomonas oleovorans NCTC10860 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,884,695 bp
GenBank #: UGUW00000000 (NZ_UGUW00000000)
REBASE acronym: Pol10860
Org_num: 42243
All begin NCTC10860_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 282 | DNA gyrase subunit B | |||
| 283 | R | Osp50ORF2245P (96% identity) | Pol10860ORF285P | |
| 284 | S | S.ScaJ1AORFAP (40% identity) | S.Pol10860ORF285P | |
| 285 | M | M.Bch19884ORFHP (73% identity) | M.Pol10860ORF285P | |
| 286 | Transposase and inactivated derivatives | |||
| 3889 | Uncharacterised protein | |||
| 3890 | M | M.PhyDSWY01ORF19815P (100% identity) | ACGNNNNNRTGT | M.Pol10860I |
| 3891 | anticodon nuclease | |||
| 3892 | S | S.ZbaParf2ORF2500P (100% identity) | ACGNNNNNRTGT | S.Pol10860I |
| 3893 | ATP-dependent DNA helicase | |||
| 3894 | SMC domain-containing protein | |||
| 3895 | R | PhyDSWY01ORF19815P (100% identity) | ACGNNNNNRTGT | Pol10860IP |
| 3896 | excisionase family DNA-binding domain-containing | |||
| 4831 | Uncharacterised protein | |||
| ??? | R | PstG19ORF18330P (82% identity) | GCCNNNNNCTCC | Pol10860IIP |
| 4835 | S | S.PstG19ORF18330P (99% identity) | GCCNNNNNCTCC | S.Pol10860II |
| 4836 | Uncharacterised protein | |||
| 4837 | XRE family transcriptional regulator | |||
| 4838 | Plasmid maintenance system killer protein | |||
| 4839 | Divergent AAA domain | |||
| 4840 | M | M2.PaeBL12ORF3635P (97% identity) | GCCNNNNNCTCC | M2.Pol10860II |
| 4841 | Uncharacterised protein | |||
| 4842 | M | M1.PaeBL12ORF3635P (99% identity) | GCCNNNNNCTCC | M1.Pol10860II |
| 4843 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1238 | dihydrodipicolinate reductase | |||
| 1239 | R | PspDV1ORF4795P (100% identity) | GGWCC | Pol10860ORF1240P |
| 1240 | M | M.Psp17CORF19355P (85% identity) | M.Pol10860ORF1240P | |
| 1241 | carbamoyl phosphate synthase small subunit | |||
| 1555 | Uncharacterised protein | |||
| 1556 | RM | PstST9ORF6125P (18% identity) | Pol10860ORF1556DP | |
| 1557 | transposase | |||
| 1558 | porin | |||
| 1559 | transposase | |||
| ??? | RM | Pxa23572ORF820P (10% identity) | Pol10860ORF1556CP | |
| 1560 | Transposase and inactivated derivatives | |||
| 1561 | RM | Pxa23572ORF820P (37% identity) | Pol10860ORF1556BP | |
| 1562 | RM | PspD7DII (22% identity) | Pol10860ORF1556AP | |
| 1563 | Competence protein | |||
| 2068 | Uncharacterised protein | |||
| 2069 | M | M.HspSMJS2ORF10670P (82% identity) | M.Pol10860ORF2069P | |
| 2070 | gp57 | |||
| 2414 | Uncharacterised protein | |||
| 2416 | M | M.Pps5344ORF1977P (95% identity) | M.Pol10860ORF2416P | |
| 2417 | DNA topoisomerase III | |||
| 2789 | Uncharacterised protein | |||
| ??? | V | V.Pme10898ORF4478P (93% identity) | V.Pol10860ORF2790P | |
| 2790 | M | M.PspPc102ORF20040P (96% identity) | M.Pol10860ORF2790P | |
| 2791 | Uncharacterised protein | |||
| 3599 | Transposase and inactivated derivatives | |||
| 3600 | M | M.Pol4132ORF6300P (100% identity) | M.Pol10860ORF3600P | |
| 3601 | mechanosensitive ion channel protein MscS | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2180 | amidohydrolase 2 | |||
| 2181 | R | Pme10692ORF4171P (99% identity) | Pol10860ORF2182P | |
| 2182 | M | M.PtoSM2ORF50P (68% identity) | M.Pol10860ORF2182P | |
| 2183 | filamentation induced by cAMP protein fic | |||
| 4493 | glycerophosphoryl diester phosphodiesterase | |||
| 4494 | R | Psp17CORF7210P (96% identity) | Pol10860ORF4496P | |
| 4495 | DNA-binding protein | |||
| 4496 | M | M.Psp17CORF7210P (21% identity) | M.Pol10860ORF4496P | |
| 4497 | Uncharacterised protein | |||