Pseudomonas alcaligenes NCTC10367 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas alcaligenes NCTC10367 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,016,483 bp
GenBank #: UGUP00000000 (NZ_UGUP00000000)
REBASE acronym: Pal10367
Org_num: 42235
All begin NCTC10367_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 535 | type I restriction-modification system subunit | |||
| 536 | M | M.PdePDENORFEP (99% identity) | GAACNNNNNGAT | M.Pal10367I |
| 537 | S | S2.PdePDENORFEP (98% identity) | GAACNNNNNGAT | S.Pal10367I |
| 538 | haloacid dehalogenase-like hydrolase | |||
| 539 | DNA-binding protein | |||
| 540 | R | PaeXP23ORF33520P (99% identity) | GAACNNNNNGAT | Pal10367IP |
| 541 | metal-dependent hydrolase | |||
| 1533 | two-component response regulator PilR | |||
| 1534 | R | Psp8999ORF59750P (98% identity) | CNGANNNNNNRTTGY | Pal10367IIP |
| 1535 | DNA recombination protein RmuC | |||
| 1536 | M | M.Pol4132ORF850P (97% identity) | CNGANNNNNNRTTGY | M.Pal10367II |
| 1537 | S | S.DspIOR2ORFAP (23% identity) | CNGANNNNNNRTTGY | S.Pal10367II |
| 1538 | SMC domain-containing protein | |||
| 2810 | ProQ activator of osmoprotectant transporter | |||
| 2811 | R | Psp2021ORF28890P (89% identity) | Pal10367ORF2816P | |
| 2812 | transposase | |||
| 2813 | transposase IS3 | |||
| 2814 | type I restriction-modification system subunit | |||
| 2815 | S | S.PspChol1ORF2486P (66% identity) | S.Pal10367ORF2816P | |
| 2816 | M | M.PspKK18ORFBP (87% identity) | M.Pal10367ORF2816P | |
| 2817 | phage integrase | |||
| 4396 | Uncharacterised protein | |||
| 4397 | R | Psp66ORF35P (94% identity) | Pal10367ORF4399P | |
| 4398 | abortive infection bacteriophage resistance | |||
| 4399 | M | M.Psp66ORF35P (89% identity) | M.Pal10367ORF4399P | |
| 4400 | transposase | |||
| 4401 | S | S.Pst442ORF1140P (27% identity) | S1.Pal10367ORF4399P | |
| 4402 | ISPsy14, transposition helper protein | |||
| 4403 | ISPsy14, transposase | |||
| ??? | S | S.EsaSS822ORFAP (41% identity) | S2.Pal10367ORF4399P | |
| 4404 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 306 | Uncharacterised protein | |||
| 307 | M | M.PaeAE04ORF20610P (85% identity) | M.Pal10367ORF307P | |
| 308 | Uncharacterised protein | |||
| 2832 | helicase/SNF2 family domain protein | |||
| 2833 | M | M.AspNIH3ORF15645P (20% identity) | M.Pal10367ORF2833P | |
| 2834 | Uncharacterised protein | |||
| 3519 | Uncharacterised protein | |||
| 3520 | M | M.Pae501ORF18080P (92% identity) | M.Pal10367ORF3520P | |
| 3521 | Uncharacterised protein | |||
| 3569 | Uncharacterised protein | |||
| 3570 | M | M.PhyDSWY01ORF15760P (74% identity) | M.Pal10367ORF3570P | |
| 3571 | Uncharacterised protein | |||