Prevotella pallens NCTC13043 |
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Putative Prevotella pallens NCTC13043 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 3,108,714 bp
GenBank #: UGTP00000000 (NZ_UGTP00000000)
REBASE acronym: Ppa13043
Org_num: 41902
All begin NCTC13043_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2636 | Uncharacterised protein | |||
| ??? | R | Ppa13043ORF547P (99% identity) | Ppa13043ORF2649P | |
| 2640 | Uncharacterised protein | |||
| 2641 | S | S2.Ppa13043ORF547P (41% identity) | S4.Ppa13043ORF2649P | |
| 2642 | cell filamentation protein Fic | |||
| 2643 | S | S3.Ppa13043ORF547P (100% identity) | S3.Ppa13043ORF2649P | |
| 2644 | S | S2.Ppa13043ORF547P (61% identity) | S2.Ppa13043ORF2649P | |
| 2645 | Uncharacterised protein | |||
| 2646 | S | S1.Ppa13043ORF547P (100% identity) | S1.Ppa13043ORF2649P | |
| 2647 | Tyrosine recombinase XerC | |||
| 2648 | Uncharacterised protein | |||
| 2649 | M | M.Ppa13043ORF547P (16% identity) | M.Ppa13043ORF2649P | |
| 2553 | Predicted transcriptional regulator | |||
| 2554 | R | Bvi23226ORF11065P (82% identity) | Ppa13043ORF2555P | |
| 2555 | M | M.Bvi23226ORF11065P (90% identity) | M.Ppa13043ORF2555P | |
| 2556 | Protein of uncharacterised function (DUF3800) | |||
| 2557 | Uncharacterised protein | |||
| 2558 | S | S2.Bvi23226ORF11065P (69% identity) | S1.Ppa13043ORF2555P | |
| 2559 | S | S2.PhiF0411III (53% identity) | S2.Ppa13043ORF2555P | |
| 2560 | Protein of uncharacterised function (DUF3853) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 76 | Virulence protein | |||
| 77 | RM | Pni109ORF4435P (74% identity) | Ppa13043ORF77P | |
| 78 | ATP-dependent RNA helicase rhlE | |||
| 2529 | Uncharacterised protein | |||
| 2530 | C | C.Pde18CAORF1026P (95% identity) | C.Ppa13043ORF2531P | |
| 2531 | M | M.Pin1101ORFEP (99% identity) | M.Ppa13043ORF2531P | |
| 2532 | R | Pin1101ORFEP (98% identity) | Ppa13043ORF2531P | |
| 2533 | LlaJI restriction endonuclease | |||
| 1981 | Uncharacterised protein | |||
| 1982 | M | M.PspHUN102ORFOP (94% identity) | M.Ppa13043ORF1982P | |
| 1983 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1844 | Aminopeptidase E | |||
| 1845 | M | M.PspF0648ORF11900P (90% identity) | M.Ppa13043ORF1845P | |
| 1846 | R | PspF0648ORF11900P (82% identity) | Ppa13043ORF1845P | |
| 1847 | thiol-disulfide oxidoreductase | |||