Prevotella intermedia NCTC13070 |
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Putative Prevotella intermedia NCTC13070 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,607,163 bp
GenBank #: UGTO00000000 (NZ_UGTO00000000)
REBASE acronym: Pin13070
Org_num: 41900
All begin NCTC13070_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 750 | Integrase | |||
| 751 | S | S1.Pcl1C4ORF28110P (54% identity) | S2.Pin13070IIIP | |
| 752 | S | S.Pin25611ORFBP (60% identity) | GAAYNNNNNNTTG | S1.Pin13070III |
| 753 | Uncharacterised protein | |||
| 754 | M | M.PinZORFCP (100% identity) | GAAYNNNNNNTTG | M.Pin13070III |
| 755 | Uncharacterised protein | |||
| 756 | R | PinZORFCP (100% identity) | GAAYNNNNNNTTG | Pin13070IIIP |
| ??? | C | C.PinZORFCP (100% identity) | C.Pin13070IIIP | |
| 757 | Immune inhibitor A precursor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |||
| 16 | M | M.PinZORFBP (100% identity) | GATC | M.Pin13070I |
| 17 | R | PinZORFBP (100% identity) | GATC | Pin13070IP |
| 18 | Uncharacterised protein | |||
| 1934 | Protein of uncharacterised function (DUF3853) | |||
| 1935 | C | C.Pma19339ORFCP (100% identity) | C.Pin13070IIP | |
| 1936 | M | M.PinZORFGP (100% identity) | GAGNNNNTAC | M.Pin13070II |
| 1937 | S | S.PinZORFGP (100% identity) | GAGNNNNTAC | S.Pin13070II |
| 1938 | Uncharacterised protein | |||
| 2240 | Uncharacterised protein | |||
| 2241 | M | M2.PinZORFHP (100% identity) | GGATG | M1.Pin13070IV |
| 2242 | M | M1.Pin25611ORFFP (100% identity) | GGATG | M2.Pin13070IV |
| 2243 | R | PinZORFHP (100% identity) | GGATG | Pin13070IVP |
| 1140 | Prolipoprotein diacylglyceryl transferase | |||
| 1141 | M | M.PinZORFFP (100% identity) | M.Pin13070ORF1141P | |
| 1142 | Protein of uncharacterised function DUF262 | |||
| 1141 | Uncharacterised protein | |||
| 1142 | R | PinZORFFP (100% identity) | Pin13070ORF1142P | |
| 1143 | DNA mismatch repair protein mutS | |||
| 1197 | Uncharacterised protein | |||
| 1198 | C | C.PinZORFEP (100% identity) | C.Pin13070ORF1199P | |
| 1199 | M | M.PinZORFEP (100% identity) | GCWGC | M.Pin13070ORF1199P |
| 1200 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1692 | Uncharacterised protein | |||
| 1693 | R | PinZMcrCP (100% identity) | Pin13070McrCP | |
| 1694 | R | PinZMcrBP (100% identity) | Pin13070McrBP | |
| 1695 | Uncharacterised protein | |||