Parabacteroides merdae NCTC13052 |
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Putative Parabacteroides merdae NCTC13052 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,403,124 bp
GenBank #: UFTK00000000 (NZ_UFTK00000000)
REBASE acronym: Pme13052
Org_num: 41601
All begin NCTC13052_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3516 | Por secretion system C-terminal sorting domain | |||
| 3517 | M | M.Pme43184ORF6750P (100% identity) | RTAGNNNNNTGA | M.Pme13052II |
| 3518 | phage integrase protein | |||
| 3519 | S | S1.Pme43184ORF6750P (100% identity) | S1.Pme13052IIP | |
| 3520 | S | S2.Pme43184ORF6750P (100% identity) | RTAGNNNNNTGA | S2.Pme13052II |
| 3521 | S | S3.Pme43184ORF6750P (100% identity) | S3.Pme13052IIP | |
| 3522 | S | S4.Pme43184ORF6750P (100% identity) | S4.Pme13052IIP | |
| 3523 | R | Pme43184ORF6750P (100% identity) | RTAGNNNNNTGA | Pme13052IIP |
| 3524 | Protein of uncharacterised function (DUF3644) | |||
| 2967 | exonuclease V subunit alpha | |||
| 2968 | R | Pme43184ORF9365P (100% identity) | GGANNNNNNACT | Pme13052IP |
| 2969 | S | S.Pme43184ORF9365P (98% identity) | GGANNNNNNACT | S.Pme13052I |
| 2970 | M | M.Pme43184ORF9365P (100% identity) | GGANNNNNNACT | M.Pme13052I |
| 2971 | C | C.Pme43184ORF9365P (100% identity) | C.Pme13052IP | |
| 2972 | Restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3562 | Uncharacterised protein | |||
| 3563 | M | M2.Pme43184ORF6530P (100% identity) | M1.Pme13052ORF3563P | |
| 3564 | Uncharacterised protein | |||
| 3565 | M | M1.Pme43184ORF6530P (100% identity) | M2.Pme13052ORF3563P | |
| 3566 | YopX protein | |||