Helicobacter pullorum NCTC13156 |
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Putative Helicobacter pullorum NCTC13156 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,787,994 bp
GenBank #: UGJF00000000 (NZ_UGJF00000000)
REBASE acronym: Hpu13156
Org_num: 43568
All begin NCTC13156_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1104 | cytolethal distending toxin CdtA | |||
| 1105 | R | CcoP3O1ORF2595P (55% identity) | GAGNNNNNGRT | Hpu13156IP |
| 1106 | Uncharacterised protein | |||
| 1107 | Uncharacterised protein | |||
| 1108 | S | S2.Fen1006II (30% identity) | GAGNNNNNGRT | S.Hpu13156I |
| 1109 | DNA binding protein | |||
| 1110 | M | M.Cfe4531ORF505P (73% identity) | GAGNNNNNGRT | M.Hpu13156I |
| 1111 | restriction modification system DNA specificity | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 447 | Uncharacterised protein | |||
| 448 | RM | Hpu5489ORFDP (68% identity) | Hpu13156ORF448P | |
| 449 | heat shock transcriptional regulator | |||
| 510 | guanosine monophosphate synthetase GuaA | |||
| 511 | R | Hwi435ORF6305P (80% identity) | GATATC | Hpu13156IIP |
| 512 | M | M.Hwi435ORF6305P (70% identity) | GATATC | M.Hpu13156II |
| 513 | guanosine monophosphate synthetase GuaA | |||
| 927 | fumarate hydratase class II | |||
| ??? | R | Cup3940ORF1467P (76% identity) | Hpu13156ORF929P | |
| ??? | M | M.Chy27631ORF1829P (64% identity) | M.Hpu13156ORF929P | |
| 930 | hydrogenase isoenzymes formation protein | |||
| 1232 | adenylosuccinate lyase | |||
| 1233 | M | M.Hpu13154I (91% identity) | GANTC | M.Hpu13156III |
| 1234 | DoxX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 635 | Zinc transporter ZupT | |||
| 636 | M | M.Cla11760ORF1519P (62% identity) | M.Hpu13156ORF636P | |
| 637 | R | Csp216ORF120P (92% identity) | Hpu13156ORF636P | |
| 638 | NifU-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 863 | biopolymer transport protein | |||
| 864 | R | Hpu13154McrCP (98% identity) | Hpu13156McrCP | |
| 865 | R | Hpu5489McrBP (55% identity) | Hpu13156McrBP | |
| 866 | dihydroxy-acid dehydratase | |||