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Putative Helicobacter pametensis NCTC12888 RM systems
Ref:
REBASE ref # 22501
Contig set: 1,918,356 bp
GenBank #: UYIU00000000 (NZ_UYIU00000000)
REBASE acronym: Hpa12888
Org_num: 43567
All begin NCTC12888_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1000 | D-malate degradation protein R | |||
1001 | S | S.Nsi3584ORFBP (57% identity) | S.Hpa12888ORF1002P | |
1002 | M | M.Nsi3584ORFBP (96% identity) | M.Hpa12888ORF1002P | |
1003 | NAD(P)H oxidoreductase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
95 | phenylalanyl-tRNA synthetase subunit alpha | |||
96 | V | V.Nbe329ORFGP (95% identity) | V.Hpa12888ORF97P | |
97 | M | M.Nci13859ORFAP (93% identity) | M.Hpa12888ORF97P | |
98 | R | Kpo13336ORF868P (56% identity) | Hpa12888ORF97P | |
99 | Phenylalanyl-tRNA synthetase beta chain | |||
929 | L-lactate permease | |||
930 | R | Npo18661ORFCP (95% identity) | Hpa12888ORF930P | |
931 | adenine-specific methyltransferase | |||
930 | Protein of uncharacterised function DUF262 | |||
931 | M | M.Npo11231ORFHP (96% identity) | M.Hpa12888ORF931P | |
932 | alanyl-tRNA synthetase | |||
1286 | Uncharacterised protein | |||
1287 | M | M1.Spe19205IV (37% identity) | M.Hpa12888ORF1287P | |
1288 | type II restriction m6 adenine DNA | |||
1287 | Uncharacterised protein | |||
1288 | M | M2.Nzo12229ORF1329P (66% identity) | M.Hpa12888ORF1288P | |
1289 | Uncharacterised protein | |||
1400 | type II restriction m6 adenine DNA | |||
1401 | M | M.Rgn2154II (62% identity) | CTSAG | M.Hpa12888I |
1402 | Transposase and inactivated derivatives | |||
1738 | Uncharacterised protein | |||
1739 | M | M.Mha7982ORF7955P (51% identity) | M.Hpa12888ORF1739P | |
1740 | Enoyl reductase domain of yeast-type FAS1 | |||
1786 | ATP-dependent RNA helicase HrpA | |||
1787 | R | Nmu10774ORF1492P (95% identity) | Hpa12888ORF1788P | |
1788 | M | M.Nsu9653ORFEP (97% identity) | M.Hpa12888ORF1788P | |
1789 | ATP-dependent RNA helicase HrpA | |||
1804 | SSU ribosomal protein S1p | |||
1805 | RM | Nel3085ORFLP (88% identity) | Hpa12888ORF1805P | |
1806 | Virulence protein |