Helicobacter fennelliae NCTC11613 |
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Putative Helicobacter fennelliae NCTC11613 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,223,074 bp
GenBank #: UGIB00000000 (NZ_UGIB00000000)
REBASE acronym: Hfe11613
Org_num: 43562
All begin NCTC11613_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 652 | thiamine biosynthesis protein (thi) | |||
| 653 | S | S.Hfe50ORF996P (100% identity) | S.Hfe11613ORF656P | |
| 654 | Uncharacterised protein | |||
| 655 | CAAX protease | |||
| 656 | M | M.Hfe50ORF996P (100% identity) | M.Hfe11613ORF656P | |
| 657 | saccharopine dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2110 | GMP synthase | |||
| 2111 | R | Hfe50ORF2294P (100% identity) | GATC | Hfe11613IIIP |
| 2112 | M | M.Hfe50ORF2294P (100% identity) | GATC | M.Hfe11613III |
| 2113 | acyltransferase | |||
| 66 | Uncharacterised protein | |||
| 67 | M | M.Hfe50ORF1632P (100% identity) | M.Hfe11613ORF67P | |
| 68 | Uncharacterised protein | |||
| 251 | Uncharacterised protein | |||
| ??? | M | M.Hfe50ORF1845P (99% identity) | ACNGT | M.Hfe11613II |
| 253 | Uncharacterised protein | |||
| 254 | adenine-specific DNA methylase | |||
| 255 | R | Hfe50ORF1845P (100% identity) | ACNGT | Hfe11613IIP |
| 256 | methyltransferase | |||
| 253 | Uncharacterised protein | |||
| 254 | M | M.Hfe50ORF1847P (100% identity) | M.Hfe11613ORF254P | |
| 255 | Type II restriction endonuclease | |||
| 525 | SAM-dependent methyltransferase | |||
| ??? | R | Hfe50ORF2164P (100% identity) | Hfe11613ORF528P | |
| 528 | M | M.Hfe13102ORF143P (100% identity) | M.Hfe11613ORF528P | |
| 529 | Phosphoglycolate phosphatase | |||
| 530 | Uncharacterised protein | |||
| 531 | M | M.Hfe50ORF2160P (100% identity) | M1.Hfe11613ORF531P | |
| 532 | M | M.Hfe50ORF2159P (100% identity) | M2.Hfe11613ORF531P | |
| 533 | R | Hfe50ORF2159P (100% identity) | Hfe11613ORF531P | |
| 534 | NADP-dependent L-serine/L-allo-threonine | |||
| 548 | nodulation protein L | |||
| 549 | M | M.Hfe50ORF2139P (100% identity) | GCATC | M1.Hfe11613I |
| 550 | R | Hfe13102ORF123P (99% identity) | GCATC | Hfe11613IP |
| 551 | M | M.Hfe50ORF2137P (100% identity) | GCATC | M2.Hfe11613I |
| 552 | oxidoreductase, aldo/keto reductase family | |||
| 672 | Integral membrane protein | |||
| 673 | RM | Hfe13102ORF1974AP (99% identity) | Hfe11613ORF673AP | |
| 674 | RM | Hfe50ORF975P (74% identity) | Hfe11613ORF673BP | |
| 675 | Uncharacterized protein conserved in archaea | |||
| 716 | Type II restriction enzyme M protein | |||
| 717 | M | M.Hfe50ORF927P (100% identity) | M.Hfe11613ORF717P | |
| 718 | restriction endonuclease | |||
| 960 | Uncharacterised protein | |||
| 961 | M | M.Hfe50ORF1575P (100% identity) | M.Hfe11613ORF961P | |
| 962 | Uncharacterised protein | |||
| 1181 | YopX protein | |||
| 1182 | M | M.Hty6810ORF4675P (90% identity) | M.Hfe11613ORF1182P | |
| 1183 | Uncharacterised protein | |||
| 1575 | Uncharacterised protein | |||
| 1576 | RM | Hfe50ORF1365P (100% identity) | Hfe11613ORF1576P | |
| 1577 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1033 | Predicted transcriptional regulator | |||
| 1034 | M | M.Hfe50ORF1418P (100% identity) | M.Hfe11613ORF1034P | |
| 1035 | Uncharacterized conserved protein | |||
| 1601 | Uncharacterised protein | |||
| 1602 | R | Hfe50ORF2430P (100% identity) | Hfe11613ORF1603P | |
| ??? | M | M.Hfe50ORF2430P (100% identity) | M.Hfe11613ORF1603P | |
| 1605 | Uncharacterised protein | |||
| 1902 | Oleate hydratase | |||
| 1903 | R | Hfe50ORF518P (100% identity) | Hfe11613ORF1904P | |
| ??? | M | M.Hfe50ORF518P (99% identity) | M.Hfe11613ORF1904P | |
| 1906 | 4-oxalocrotonate tautomerase enzyme family | |||