Helicobacter canadensis NCTC13221 |
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Putative Helicobacter canadensis NCTC13221 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,638,064 bp
GenBank #: UGHW00000000 (NZ_UGHW00000000)
REBASE acronym: Hca13221
Org_num: 43558
All begin NCTC13221_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1445 | Streptogramin lyase | |||
| ??? | R | Hca5491ORF1358P (100% identity) | GAYNNNNNNRTAG | Hca13221IIIP |
| 1448 | Domain of uncharacterised function (DUF1837) | |||
| 1449 | Domain of uncharacterised function (DUF1837) | |||
| 1450 | ski2-like helicase | |||
| 1451 | S | S.Hca5491ORF1358P (99% identity) | GAYNNNNNNRTAG | S.Hca13221III |
| 1452 | DNA binding protein | |||
| 1453 | M | M.Hca5491ORF1358P (100% identity) | GAYNNNNNNRTAG | M.Hca13221III |
| 1458 | Protein of uncharacterised function (DUF3298) | |||
| 269 | GTP-binding protein | |||
| 270 | R | Hca5491ORF530P (100% identity) | ACCNNNNNNTAG | Hca13221IVP |
| 271 | S | S.Hca1348ORFCP (100% identity) | ACCNNNNNNTAG | S.Hca13221IV |
| 272 | Uncharacterized protein conserved in bacteria | |||
| 273 | M | M.Hca5491ORF530P (100% identity) | ACCNNNNNNTAG | M.Hca13221IV |
| 274 | helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1349 | DoxX | |||
| 1350 | M | M.Hca5491ORF1458P (95% identity) | GANTC | M.Hca13221I |
| 1351 | adenylosuccinate lyase | |||
| 1587 | Type IIG restriction-modification enzyme | |||
| 1588 | R | Hca5491ORF1230P (100% identity) | Hca13221ORF1589P | |
| 1589 | M | M.Hca5491ORF1230P (100% identity) | M.Hca13221ORF1589P | |
| 1590 | guanosine monophosphate synthetase GuaA | |||
| 502 | cystathionine gamma-lyase | |||
| 503 | RM | Hca5491ORF755P (100% identity) | CACNNNNNRTAY | Hca13221V |
| 504 | Uncharacterized conserved protein | |||
| 683 | Domain of uncharacterised function (DUF336) | |||
| ??? | M | M.Hca1348ORFJP (100% identity) | CCTC | M.Hca13221II |
| ??? | R | Hca1348ORFJP (100% identity) | CCTC | Hca13221IIP |
| 686 | Uncharacterised protein | |||
| 984 | isocitrate dehydrogenase | |||
| ??? | R | Hca1348ORFHP (100% identity) | Hca13221ORF987P | |
| ??? | M | M.Hca1348ORFHP (100% identity) | M.Hca13221ORF987P | |
| 989 | argininosuccinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 447 | saccharopine dehydrogenase | |||
| 448 | M | M.Hca5491ORF701P (100% identity) | M.Hca13221ORF448P | |
| 449 | Uncharacterized protein containing caspase | |||
| 450 | DNA binding protein | |||
| 451 | R | Hca5491ORF701P (100% identity) | Hca13221ORF448P | |
| 452 | hydrolase ydeN | |||