Haemophilus parahaemolyticus HK385 |
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Putative Haemophilus parahaemolyticus HK385 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,096,197 bp
GenBank #: UGHI00000000 (NZ_UGHI00000000)
REBASE acronym: Hpa8479
Org_num: 43550
All begin NCTC8479_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 418 | phosphoserine aminotransferase | |||
| 419 | M | M.Hpa1199ORF3930P (80% identity) | M.Hpa8479ORF419P | |
| 420 | S | S.Hpa1199ORF3930P (100% identity) | S.Hpa8479ORF419P | |
| 421 | FRG domain | |||
| 422 | R | Hpa1199ORF3930P (100% identity) | Hpa8479ORF419P | |
| 423 | CDP-diacylglycerol--glycerol-3-phosphate | |||
| 610 | transcriptional regulator | |||
| ??? | M | M.Hpa1199ORF2985P (100% identity) | M.Hpa8479ORF611P | |
| 613 | S | S.Hpa1199ORF2985P (100% identity) | S.Hpa8479ORF611P | |
| 614 | Uncharacterised protein | |||
| 615 | R | Hpa1199ORF2985P (100% identity) | Hpa8479ORF611P | |
| 616 | Uncharacterised protein | |||
| 957 | acetyl-CoA carboxylase subunit beta | |||
| 958 | M | M.Hpa1199ORF1275P (100% identity) | M.Hpa8479ORF958P | |
| 959 | restriction modification system DNA specificity | |||
| 960 | S | S2.Hpa1199ORF1275P (88% identity) | S.Hpa8479ORF958P | |
| 961 | R | Hpa1199ORF1275P (100% identity) | Hpa8479ORF958P | |
| 962 | phage integrase | |||
| 1591 | DNA-binding transcriptional regulator AsnC | |||
| 1592 | M | M.Hpa1199ORF8320P (100% identity) | M.Hpa8479ORF1592P | |
| 1593 | DNA binding protein | |||
| 1594 | S | S.Hpa1199ORF8320P (100% identity) | S.Hpa8479ORF1592P | |
| 1595 | anticodon nuclease | |||
| 1596 | R | Hpa1199ORF8320P (100% identity) | Hpa8479ORF1592P | |
| 1597 | DNA polymerase III subunit delta | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 485 | tryptophan synthase subunit alpha | |||
| 486 | RM | Hpa1199ORF3590P (100% identity) | Hpa8479ORF486P | |
| 487 | S | S.Hpa1199ORF3590P (100% identity) | S.Hpa8479ORF486P | |
| 488 | DNA polymerase I | |||
| 662 | bacteriophage replication gene A | |||
| 663 | M | M.Hpa788ORF2430P (99% identity) | M.Hpa8479ORF663P | |
| 664 | Uncharacterised protein | |||
| 810 | Internalin-A precursor | |||
| 811 | M | M.Hpa1199ORF1995P (100% identity) | M.Hpa8479ORF811P | |
| 812 | Uncharacterized protein conserved in bacteria | |||
| 1426 | Predicted transcriptional regulator | |||
| 1427 | M | M.Hpa1199ORF9165P (100% identity) | GCGC | M.Hpa8479ORF1427P |
| 1428 | R | Hpa1199ORF9165P (100% identity) | GCGC | Hpa8479ORF1427P |
| 1429 | arginine transporter ATP-binding protein | |||
| 1557 | penicillin-binding protein 1B (PBP1b) | |||
| 1558 | R | Hpa1199ORF8500P (100% identity) | GANTC | Hpa8479IP |
| 1559 | M | M.Hpa1199ORF8500P (100% identity) | GANTC | M.Hpa8479I |
| 1560 | naphthoate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 717 | translation initiation factor IF-2 | |||
| 718 | M | M.Hpa1199ORF2450P (90% identity) | M.Hpa8479ORF718P | |
| 719 | R | Hpa1199ORF2450P (100% identity) | Hpa8479ORF718P | |
| 720 | superfamily II DNA/RNA helicase, SNF2 family, | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1207 | 3-dehydroquinate synthase | |||
| 1208 | M | M.Hpa1199ORF70P (100% identity) | GATC | M.Hpa8479ORF1208P |
| 1209 | permease | |||