Haemophilus haemoglobinophilus NCTC1659 |
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Putative Haemophilus haemoglobinophilus NCTC1659 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,436,406 bp
GenBank #: UGHF00000000 (NZ_UGHF00000000)
REBASE acronym: Hha1659
Org_num: 43547
All begin NCTC1659_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2463 | Uncharacterized conserved protein | |||
| ??? | R | Hha8540VIP (100% identity) | Hha1659ORF2467P | |
| 2466 | Uncharacterised protein | |||
| 2467 | M | M.Hha8540VI (100% identity) | M.Hha1659ORF2467P | |
| 2468 | S | S1.Hha10619V (99% identity) | S1.Hha1659ORF2467P | |
| 2469 | site-specific tyrosine recombinase | |||
| 2470 | S | S1.Hha1659ORF19P (56% identity) | S2.Hha1659ORF2467P | |
| 2471 | fepc protein | |||
| 15 | fepc protein | |||
| 16 | S | S1.Hha8540ORF2307P (58% identity) | S2.Hha1659ORF19P | |
| 17 | site-specific tyrosine recombinase | |||
| 18 | S | S1.Hha1659ORF2467P (74% identity) | S1.Hha1659ORF19P | |
| 19 | M | M.Hha8540VI (100% identity) | M.Hha1659ORF19P | |
| 20 | Uncharacterised protein | |||
| 21 | R | Hha8540VIP (100% identity) | Hha1659ORF19P | |
| 22 | Uncharacterized conserved protein | |||
| 158 | cystathionine gamma-synthase | |||
| 162 | M | M.Hha8540II (99% identity) | GAYNNNNNNGTGG | M.Hha1659III |
| 163 | S | S.Hha8540II (67% identity) | GAYNNNNNNGTGG | S.Hha1659III |
| 164 | R | Hha8540IIP (99% identity) | GAYNNNNNNGTGG | Hha1659IIIP |
| 165 | 3-dehydroquinate dehydratase | |||
| 192 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 193 | R | CdiST848ORF16245P (54% identity) | ACANNNNNNNTGAY | Hha1659IP |
| 194 | M | M.AurM3ORF1828P (58% identity) | ACANNNNNNNTGAY | M.Hha1659I |
| 195 | S | S2.Ase10851ORF2389P (48% identity) | ACANNNNNNNTGAY | S1.Hha1659I |
| 196 | S | S2.Pma10699ORF1121P (44% identity) | S2.Hha1659IP | |
| 197 | phage integrase | |||
| 250 | oxidoreductase with FAD/NAD(P)-binding domain | |||
| 251 | R | Hha8540IIIP (89% identity) | Hha1659ORF257P | |
| 252 | Type I site-specific restriction-modification | |||
| 253 | Uncharacterized protein conserved in bacteria | |||
| 254 | XRE family transcriptional regulator | |||
| 255 | FRG domain | |||
| 256 | S | S.PspNLN53ORFAP (43% identity) | S.Hha1659ORF257P | |
| 257 | M | M.Hha10619ORF2144P (99% identity) | M.Hha1659ORF257P | |
| 258 | catalase | |||
| 1128 | Predicted permease, DMT superfamily | |||
| 1129 | M | M.Hha8540IV (97% identity) | M.Hha1659ORF1129P | |
| 1130 | glutamate-1-semialdehyde 2,1-aminomutase | |||
| 1131 | S | S.HinIII4ORF8150P (32% identity) | S1.Hha1659ORF1129P | |
| 1132 | S | S.BceH111I (34% identity) | S2.Hha1659ORF1129P | |
| 1133 | DNA binding protein | |||
| 1134 | Uncharacterized protein conserved in bacteria | |||
| 1135 | R | Hha8540IVP (97% identity) | Hha1659ORF1129P | |
| 1136 | dihydroxy-acid dehydratase | |||
| 1139 | lipoprotein signal peptidase | |||
| 1140 | R | Hha8540VP (92% identity) | ACTNNNNNNCGT | Hha1659IIP |
| 1141 | S | S.Hha8540V (67% identity) | ACTNNNNNNCGT | S.Hha1659II |
| 1142 | transcriptional regulator containing an hth | |||
| 1143 | M | M.Hha8540V (99% identity) | ACTNNNNNNCGT | M.Hha1659II |
| 1144 | isoleucyl-tRNA synthetase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 82 | relaxase/mobilization nuclease family protein | |||
| 83 | C | C.Asp9115ORFAP (98% identity) | C.Hha1659ORF84P | |
| 84 | M | M.Csp6914ORF435P (99% identity) | M.Hha1659ORF84P | |
| 85 | R | M.Asp9115ORFAP (46% identity) | Hha1659ORF84P | |
| 86 | histidine kinase | |||
| 86 | histidine kinase | |||
| 87 | M | M.EfaVSI36ORF2500P (80% identity) | M.Hha1659ORF87P | |
| 88 | Uncharacterised protein | |||
| 87 | modification methylase haeiii | |||
| 88 | R | Vpa2008ORF185P (81% identity) | Hha1659ORF88P | |
| 89 | glutathione reductase | |||
| 935 | Uncharacterised protein | |||
| 936 | M | M.Hha8540ORF1577P (100% identity) | M.Hha1659ORF936P | |
| 937 | ribulose-phosphate 3-epimerase | |||
| 1375 | replicative DNA helicase | |||
| 1376 | M | M.Hha8540ORF1474P (100% identity) | M.Hha1659ORF1376P | |
| 1377 | Uncharacterised protein | |||
| 1591 | Uncharacterised protein | |||
| 1592 | M | M.HsoORF241P (91% identity) | M.Hha1659ORF1592P | |
| 1593 | Uncharacterised protein | |||
| 1716 | dsDNA-mimic protein | |||
| 1717 | M | M1.Hha8540ORF1171P (99% identity) | M1.Hha1659ORF1717P | |
| 1718 | M | M2.Hha8540ORF1171P (98% identity) | M2.Hha1659ORF1717P | |
| 1719 | RM | Hha8540ORF1171P (98% identity) | Hha1659ORF1717P | |
| 1720 | phosphoenolpyruvate carboxylase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1628 | sodium/calcium exchange protein | |||
| 1630 | R | Hha8540ORF1269P (96% identity) | Hha1659ORF1631P | |
| ??? | M | M.Hha8540ORF1269P (64% identity) | M.Hha1659ORF1631P | |
| 1633 | Transposase | |||
| 1932 | phosphotransferase domain-containing protein | |||
| 1933 | R | Hha8540ORF952P (99% identity) | Hha1659ORF1934P | |
| 1934 | M | M.Hha10619ORF514P (96% identity) | M.Hha1659ORF1934P | |
| 1935 | dihydro-orotate oxidase, FMN-linked | |||
| 2399 | superfamily II DNA/RNA helicase, SNF2 family, | |||
| 2400 | R | Age22231ORF3605P (92% identity) | Hha1659ORF2401P | |
| 2401 | M | M.Hin21384ORF4015P (66% identity) | M.Hha1659ORF2401P | |
| 2402 | bifunctional glutamine-synthetase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 97 | 3-dehydroquinate synthase | |||
| ??? | M | M.Hha8540ORF431P (98% identity) | M.Hha1659ORF98P | |
| 99 | UDP-glucose pyrophosphorylase | |||