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Putative Glaesserella parasuis NCTC4557 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,458,815 bp
GenBank #: UGHL00000000 (NZ_UGHL00000000)
REBASE acronym: Gpa4557
Org_num: 42883
All begin NCTC4557_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
411 | Uncharacterised protein | |||
412 | R | Gpa1804ORF9210P (99% identity) | Gpa4557ORF420P | |
413 | Lj965 prophage protein | |||
414 | Lj965 prophage protein | |||
415 | S | S.HpaSW114ORF1565P (52% identity) | S1.Gpa4557ORF420P | |
416 | S | S.HpaSH03ORF10045P (37% identity) | S2.Gpa4557ORF420P | |
417 | anticodon nuclease | |||
418 | anticodon nuclease | |||
419 | anticodon nuclease | |||
420 | M | M.HpaSW114ORF1565P (100% identity) | M.Gpa4557ORF420P | |
421 | Transposase, Mutator family protein | |||
1274 | phosphoserine aminotransferase | |||
1275 | M | M.Gpa1818ORF5815P (80% identity) | M.Gpa4557ORF1275P | |
1276 | S | S.Gpad76ORF5055P (67% identity) | S.Gpa4557ORF1275P | |
1277 | Transposase and inactivated derivatives | |||
1278 | R | Hpa29755ORF346P (99% identity) | Gpa4557ORF1275P | |
1279 | histidinol-phosphate aminotransferase | |||
2462 | tRNA uridine 5-carboxymethylaminomethyl | |||
2463 | S | S.HpaNNII (100% identity) | GTANNNNNNNCTTG | S.Gpa4557I |
2464 | R | Hpa318ORF7140P (99% identity) | GTANNNNNNNCTTG | Gpa4557IP |
2465 | Divergent AAA domain | |||
2466 | Uncharacterised protein | |||
2467 | M | M.Hpa1401ORF5210P (100% identity) | GTANNNNNNNCTTG | M.Gpa4557I |
2468 | 16S rRNA methyltransferase GidB | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
508 | glutamate-1-semialdehyde 2,1-aminomutase | |||
509 | S | S.HpaD74ORF1723P (36% identity) | S2.Gpa4557ORF511P | |
510 | S | S1.Hpa1401ORF6500P (97% identity) | S1.Gpa4557ORF511P | |
511 | RM | GpaHPS7ORF940P (100% identity) | Gpa4557ORF511P | |
512 | MarR family transcriptional regulator | |||
622 | valyl-tRNA ligase | |||
623 | M | M.Hpa12939ORF431P (99% identity) | AAGCTT | M.Gpa4557III |
624 | R | Gpad76ORF340P (100% identity) | AAGCTT | Gpa4557IIIP |
625 | Uncharacterized protein conserved in bacteria | |||
724 | enoyl-CoA hydratase/carnithine racemase-like | |||
725 | M | M.Gpa4557ORF2491P (98% identity) | M.Gpa4557ORF725P | |
726 | Uncharacterised protein | |||
830 | enoyl-CoA hydratase/carnithine racemase-like | |||
831 | M | M.Gpa4557ORF2491P (95% identity) | M.Gpa4557ORF831P | |
832 | Uncharacterised protein | |||
875 | transcriptional regulator | |||
876 | RM | Hpa74ORFGP (93% identity) | TGKMCA | Gpa4557IV |
877 | lipid-A-disaccharide synthase | |||
1425 | recombination protein NinB | |||
1426 | M | M.Hpa120103ORFMP (100% identity) | M.Gpa4557ORF1426P | |
1427 | replication protein P/putative bacteriophage | |||
1853 | 3-dehydroquinate synthase | |||
1854 | M | M.HpaSW114ORF1907P (100% identity) | GATC | M.Gpa4557ORF1854P |
1855 | Na+-dependent transporters of the SNF | |||
2291 | metal-dependent hydrolase | |||
2292 | M | M.Gpa1807ORF10570P (100% identity) | M.Gpa4557ORF2292P | |
2293 | R | GpaHPS1ORF6370P (100% identity) | Gpa4557ORF2292P | |
2294 | type IIS restriction enzyme protein | |||
2293 | HNH endonuclease | |||
2294 | S | S.HpaMNHORF1876P (96% identity) | GAGNNNNRTAA | S.Gpa4557II |
2295 | RM | Hpa12939ORF1203P (99% identity) | GAGNNNNRTAA | Gpa4557II |
2296 | ISAma3, family ISAs1 | |||
2490 | Uncharacterised protein | |||
2491 | M | M.Gpa4557ORF725P (98% identity) | M.Gpa4557ORF2491P | |
2492 | enoyl-CoA hydratase/carnithine racemase-like |