Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 2,458,815 bp

GenBank #: UGHL00000000 (NZ_UGHL00000000)

REBASE acronym: Gpa4557

Org_num: 42883

 

All begin NCTC4557_

Type I
ORF Gene Most similar Specificity Name
 
411 Uncharacterised protein
412 R Gpa1804ORF9210P (99% identity) Gpa4557ORF420P
413 Lj965 prophage protein
414 Lj965 prophage protein
415 S S.HpaSW114ORF1565P (52% identity) S1.Gpa4557ORF420P
416 S S.HpaSH03ORF10045P (37% identity) S2.Gpa4557ORF420P
417 anticodon nuclease
418 anticodon nuclease
419 anticodon nuclease
420 M M.HpaSW114ORF1565P (100% identity) M.Gpa4557ORF420P
421 Transposase, Mutator family protein
 
1274 phosphoserine aminotransferase
1275 M M.Gpa1818ORF5815P (80% identity) M.Gpa4557ORF1275P
1276 S S.Gpad76ORF5055P (67% identity) S.Gpa4557ORF1275P
1277 Transposase and inactivated derivatives
1278 R Hpa29755ORF346P (99% identity) Gpa4557ORF1275P
1279 histidinol-phosphate aminotransferase
 
2462 tRNA uridine 5-carboxymethylaminomethyl
2463 S S.HpaNNII (100% identity) GTANNNNNNNCTTG S.Gpa4557I
2464 R Hpa318ORF7140P (99% identity) GTANNNNNNNCTTG Gpa4557IP
2465 Divergent AAA domain
2466 Uncharacterised protein
2467 M M.Hpa1401ORF5210P (100% identity) GTANNNNNNNCTTG M.Gpa4557I
2468 16S rRNA methyltransferase GidB
Type II
ORF Gene Most similar Specificity Name
 
508 glutamate-1-semialdehyde 2,1-aminomutase
509 S S.HpaD74ORF1723P (36% identity) S2.Gpa4557ORF511P
510 S S1.Hpa1401ORF6500P (97% identity) S1.Gpa4557ORF511P
511 RM GpaHPS7ORF940P (100% identity) Gpa4557ORF511P
512 MarR family transcriptional regulator
 
622 valyl-tRNA ligase
623 M M.Hpa12939ORF431P (99% identity) AAGCTT M.Gpa4557III
624 R Gpad76ORF340P (100% identity) AAGCTT Gpa4557IIIP
625 Uncharacterized protein conserved in bacteria
 
724 enoyl-CoA hydratase/carnithine racemase-like
725 M M.Gpa4557ORF2491P (98% identity) M.Gpa4557ORF725P
726 Uncharacterised protein
 
830 enoyl-CoA hydratase/carnithine racemase-like
831 M M.Gpa4557ORF2491P (95% identity) M.Gpa4557ORF831P
832 Uncharacterised protein
 
875 transcriptional regulator
876 RM Hpa74ORFGP (93% identity) TGKMCA Gpa4557IV
877 lipid-A-disaccharide synthase
 
1425 recombination protein NinB
1426 M M.Hpa120103ORFMP (100% identity) M.Gpa4557ORF1426P
1427 replication protein P/putative bacteriophage
 
1853 3-dehydroquinate synthase
1854 M M.HpaSW114ORF1907P (100% identity) GATC M.Gpa4557ORF1854P
1855 Na+-dependent transporters of the SNF
 
2291 metal-dependent hydrolase
2292 M M.Gpa1807ORF10570P (100% identity) M.Gpa4557ORF2292P
2293 R GpaHPS1ORF6370P (100% identity) Gpa4557ORF2292P
2294 type IIS restriction enzyme protein
 
2293 HNH endonuclease
2294 S S.HpaMNHORF1876P (96% identity) GAGNNNNRTAA S.Gpa4557II
2295 RM Hpa12939ORF1203P (99% identity) GAGNNNNRTAA Gpa4557II
2296 ISAma3, family ISAs1
 
2490 Uncharacterised protein
2491 M M.Gpa4557ORF725P (98% identity) M.Gpa4557ORF2491P
2492 enoyl-CoA hydratase/carnithine racemase-like
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