[Flavobacterium] thermophilum NCTC11526 |
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Putative [Flavobacterium] thermophilum NCTC11526 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 3,734,128 bp
GenBank #: UGGS00000000 (NZ_UGGS00000000)
REBASE acronym: Fth11526
Org_num: 39456
All begin NCTC11526_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2630 | Uncharacterised protein | |||
| 2631 | S | S.Gsp12ORF211P (100% identity) | S.Fth11526ORF2636P | |
| 2632 | Transposase and inactivated derivatives | |||
| 2633 | Transposase | |||
| 2634 | Transposase and inactivated derivatives | |||
| 2635 | Uncharacterised protein | |||
| 2636 | M | M.Gsp12ORF211P (100% identity) | M.Fth11526ORF2636P | |
| 2637 | R | Gsp12ORF211P (100% identity) | Fth11526ORF2636P | |
| 2638 | Uncharacterised protein | |||
| 3823 | Transposase and inactivated derivatives | |||
| 3824 | M | M.GthID1I (98% identity) | GATNNNNNNTGNG | M.Fth11526I |
| 3825 | S | S.BstUII (51% identity) | GATNNNNNNTGNG | S.Fth11526I |
| 3826 | R | BssSIIIP (97% identity) | GATNNNNNNTGNG | Fth11526IP |
| 3827 | Protein of uncharacterised function DUF45 | |||
| 3631 | PD-(D/E)XK nuclease family transposase | |||
| 3632 | R | GstDG1ORF1960P (99% identity) | Fth11526ORF3634P | |
| 3633 | S | S.Gsp12ORF389P (100% identity) | S.Fth11526ORF3634P | |
| 3634 | M | M.GstDG1ORF1960P (100% identity) | M.Fth11526ORF3634P | |
| 3635 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9 | Transposase | |||
| 10 | M | M.Gsp12ORF859P (82% identity) | M.Fth11526ORF10P | |
| 11 | Protein of uncharacterised function (DUF499) | |||
| 3891 | Uncharacterised protein | |||
| ??? | M | M.GthT12ORF3786P (98% identity) | M.Fth11526ORF3892P | |
| 3894 | C | C.GthT12ORF3786P (100% identity) | C.Fth11526ORF3892P | |
| 3895 | R | GthT12ORF3786P (100% identity) | Fth11526ORF3892P | |
| 3896 | Transposase | |||
| 3905 | Uncharacterised protein | |||
| 3906 | M | M.GthT12ORF3786P (100% identity) | GGATCC | M.Fth11526III |
| 3907 | C | C.GthT12ORF3786P (100% identity) | C.Fth11526IIIP | |
| 3908 | R | GthT12ORF3786P (100% identity) | GGATCC | Fth11526IIIP |
| 3909 | Transposase | |||
| 3101 | Protein of uncharacterised function (DUF499) | |||
| 3102 | M | M.Gsp12ORF859P (82% identity) | M.Fth11526ORF10P | |
| 3103 | Transposase | |||
| 565 | Uncharacterised protein | |||
| 566 | M | M.Gst2ORF6810P (64% identity) | M.Fth11526ORF566P | |
| 567 | PglZ domain | |||
| 1397 | Uncharacterised protein | |||
| 1398 | M | M.BspQORFDP (62% identity) | M.Fth11526ORF1398P | |
| 1399 | Uncharacterised protein | |||
| 1448 | Uncharacterised protein | |||
| 1449 | M | M.BssHORFFP (66% identity) | M.Fth11526ORF1449P | |
| 1450 | Uncharacterised protein | |||
| 1471 | Uncharacterised protein | |||
| 1472 | M | M.Pna32ORF17710P (23% identity) | M.Fth11526ORF1472P | |
| 1473 | Uncharacterised protein | |||
| 1485 | Uncharacterised protein | |||
| 1486 | M | M.EsaSS248ORFAP (12% identity) | M.Fth11526ORF1486P | |
| 1487 | Uncharacterised protein | |||
| 1490 | Uncharacterised protein | |||
| 1491 | M | M.CspSO14ORF1041P (23% identity) | M.Fth11526ORF1491P | |
| 1492 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 594 | DNA helicase | |||
| 595 | M | M.Gsp12I (100% identity) | GCCAT | M.Fth11526II |
| 596 | Uncharacterised protein | |||
| 1427 | Uncharacterised protein | |||
| ??? | M | M.Gsp15ORF8970P (69% identity) | M.Fth11526ORF1428P | |
| 1430 | Uncharacterized protein conserved in bacteria | |||