Escherichia fergusonii NCTC12128 |
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Putative Escherichia fergusonii NCTC12128 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,644,359 bp
GenBank #: UGFW00000000 (NZ_UGFW00000000)
REBASE acronym: Efe12128
Org_num: 43533
All begin NCTC12128_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3987 | Uncharacterized protein conserved in bacteria | |||
| 3988 | R | EfeIP (100% identity) | CAAYNNNNNNNTGAG | Efe12128IP |
| 3989 | M | M.EfeI (100% identity) | CAAYNNNNNNNTGAG | M.Efe12128I |
| 3990 | S | S.EfeI (100% identity) | CAAYNNNNNNNTGAG | S.Efe12128I |
| 3992 | 5-methylcytosine-specific restriction enzyme | |||
| 4009 | membrane protein | |||
| 4010 | S | S.EfeII (100% identity) | CCAYNNNNNTTYG | S.Efe12128II |
| 4011 | M | M.EfeII (100% identity) | CCAYNNNNNTTYG | M.Efe12128II |
| 4012 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | Uncharacterized conserved protein | |||
| 61 | RM | M.EfeV (98% identity) | Efe12128ORF61P | |
| 62 | Uncharacterised protein | |||
| 343 | isocitrate dehydrogenase kinase/phosphatase | |||
| ??? | M | M.EfeC10ORF1445P (100% identity) | M.Efe12128ORF344P | |
| 345 | IclR family transcriptional regulator | |||
| 3625 | phage protein | |||
| 3626 | M | M.EfeORF2729P (100% identity) | M.Efe12128ORF3626P | |
| 3627 | ybl17 | |||
| 4014 | endonuclease | |||
| 4015 | R | Efe1499ORF20650P (100% identity) | Efe12128ORF4015P | |
| 4016 | phage integrase family site specific | |||
| 4152 | DNA-binding protein Fis | |||
| ??? | M | M.Efe40AORF22180P (92% identity) | ATGCAT | M.Efe12128III |
| 4155 | membrane protein | |||
| 4266 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.EfeTDamP (99% identity) | M.Efe12128DamP | |
| 4268 | DamX protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3990 | Specificity determinant for hsdM and hsdR | |||
| ??? | R | EfeTMcrBP (100% identity) | Efe12128McrB2P | |
| 3993 | R | EfeMcrCP (100% identity) | Efe12128McrC2P | |
| 4012 | Uncharacterised protein | |||
| 4013 | R | EfeMcrC2P (100% identity) | Efe12128McrCP | |
| 4014 | R | EfeMcrB2P (100% identity) | Efe12128McrBP | |
| 4015 | restriction endonuclease | |||