Escherichia coli NCTC9777 |
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Putative Escherichia coli NCTC9777 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,322,858 bp
GenBank #: UASC00000000 (NZ_UASC00000000)
REBASE acronym: EcoC9777
Org_num: 43866
All begin NCTC9777_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 736 | restriction endonuclease | |||
| 737 | M | M.Esp9308ORFIP (100% identity) | CGTANNNNNGTC | M.EcoC9777I |
| 738 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.EcoC9777I |
| 739 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | EcoC9777IP |
| 742 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4730 | YfdA | |||
| 4731 | M | M.Eco4238ORF24385P (100% identity) | M.EcoC9777ORF4731P | |
| 4732 | cytoplasmic protein | |||
| 2969 | phage protein YjhS encoded within prophage | |||
| 2975 | M | M.Eco7922ORF720P (100% identity) | M.EcoC9777ORF2975P | |
| 2976 | lipoprotein | |||
| 3860 | phosphohydrolase | |||
| 3861 | M | M.SspPIBDcmP (99% identity) | CCWGG | M.EcoC9777DcmP |
| 3862 | V | V.SsoSE61DcmP (100% identity) | V.EcoC9777DcmP | |
| 3863 | DMT superfamily transporter inner | |||
| 3263 | Protein of uncharacterised function (DUF826) | |||
| ??? | M | M.EcoCI5ORF24325P (69% identity) | M.EcoC9777ORFAP | |
| 3265 | transposase | |||
| 5278 | prophage protein ninB | |||
| 5279 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoC9777ORF5279P |
| 5282 | Ant antirepressor protein from prophage | |||
| 788 | Uncharacterised protein | |||
| 789 | R | Kpn173ORF23655P (99% identity) | CYCGRG | EcoC9777IIP |
| 790 | M | M.Eco7922II (100% identity) | CYCGRG | M.EcoC9777II |
| 791 | Prophage integrase | |||
| 4580 | TolA protein (fragment) of prophage | |||
| 4583 | M | M.EcoSCU103ORF10815P (100% identity) | M.EcoC9777ORF4583P | |
| 4584 | lipoprotein | |||
| 1806 | DamX protein | |||
| 1807 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9777DamP |
| 1808 | ribulose-phosphate 3-epimerase | |||
| 1931 | membrane protein | |||
| 1932 | M | M.EcoVCSW7ORF2325P (100% identity) | ATGCAT | M.EcoC9777ORF1932P |
| 1933 | DNA-binding protein Fis | |||
| 2877 | prophage protein ninB | |||
| 2878 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoC9777ORF2878P |
| 2880 | phage portal protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 744 | transposase | |||
| 745 | R | Eco7922GmrDP (99% identity) | EcoC9777GmrDP | |
| 746 | protein YjiS | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3960 | Uncharacterised protein | |||
| 3961 | M | M.Eco9030ORF3621P (97% identity) | M.EcoC9777ORF3961P | |
| 3962 | ribonuclease (polynucleotidyl | |||