Escherichia coli NCTC9775 |
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Putative Escherichia coli NCTC9775 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,718,274 bp
GenBank #: UFZP00000000 (NZ_UFZP00000000)
REBASE acronym: EcoC9775
Org_num: 43864
All begin NCTC9775_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2570 | restriction endonuclease | |||
| ??? | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC9775I |
| 2573 | S | S.Ecop4AORF21290P (83% identity) | RTACNNNNGTG | S1.EcoC9775I |
| 2574 | S | S.Ecos9ORF22265P (9% identity) | RTACNNNNGTG | S2.EcoC9775I |
| 2575 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC9775IP |
| 2577 | protein YjiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 125 | ISShdy1, transposase | |||
| 126 | M | M.Sso3885ORF23215P (100% identity) | SAY | M.EcoC9775ORF126P |
| 127 | cytoplasmic protein | |||
| 4461 | cytoplasmic protein | |||
| 4462 | M | M.Sso866ORF27155P (100% identity) | M.EcoC9775ORF4462P | |
| 4463 | YfdA | |||
| 440 | lipoprotein | |||
| 441 | M | M.EcoSCU103ORF9720P (95% identity) | M.EcoC9775ORF441P | |
| 447 | phage protein | |||
| 5011 | TraR/DksA family transcriptional regulator | |||
| 5012 | M | M.EcoBP231ORF14695P (99% identity) | GATC | M.EcoC9775ORF5012P |
| 5013 | replication protein for prophage | |||
| 1260 | DMT superfamily transporter inner | |||
| 1261 | V | V.SflC32DcmP (74% identity) | V.EcoC9775DcmP | |
| 1262 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC9775DcmP |
| 1263 | phosphohydrolase | |||
| 2639 | 5-methylcytosine restriction system component | |||
| 2640 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC9775IIP |
| 2641 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC9775II |
| 2642 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC9775II |
| 2643 | transposase | |||
| 3238 | phage capsid protein | |||
| 3239 | R | Eho218ORF15P (100% identity) | EcoC9775ORF3240P | |
| 3240 | M | M.SflFF22ORF10P (100% identity) | M.EcoC9775ORF3240P | |
| 3241 | Replication gene A protein (GpA) | |||
| 3935 | DamX protein | |||
| 3936 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9775DamP |
| 3937 | ribulose-phosphate 3-epimerase | |||
| 4044 | membrane protein | |||
| ??? | M | M.EspP079ORF3959P (99% identity) | ATGCAT | M.EcoC9775ORF4045P |
| 4047 | DNA-binding protein Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2637 | glycosyltransferase | |||
| 2638 | R | EcosS3McrBP (100% identity) | EcoC9775McrBP | |
| 2639 | R | EcosS9McrCP (100% identity) | EcoC9775McrCP | |
| 2640 | restriction endonuclease | |||