Escherichia coli NCTC9706 |
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Putative Escherichia coli NCTC9706 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,520,941 bp
GenBank #: UGGJ00000000 (NZ_UGGJ00000000)
REBASE acronym: EcoC9706
Org_num: 43861
All begin NCTC9706_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1660 | Uncharacterised protein | |||
| 1661 | R | Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | EcoC9706IP |
| 1662 | M | M.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | M.EcoC9706I |
| 1663 | S | S.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | S.EcoC9706I |
| 1665 | endoribonuclease SymE | |||
| 3556 | hydrolase | |||
| 3557 | R | SenSMo01ORF8345P (99% identity) | TCAGNNNNNNTGC | EcoC9706IIP |
| 3558 | metal-binding protein | |||
| 3559 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.EcoC9706II |
| 3560 | M | M.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | M.EcoC9706II |
| 3561 | Holin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5214 | YfdA | |||
| 5215 | M | M.Kpn1026ORFJP (98% identity) | M.EcoC9706ORF5215P | |
| 5216 | cytoplasmic protein | |||
| 5643 | cytoplasmic protein | |||
| 5644 | M | M.StyR64ORFAP (100% identity) | M.EcoC9706ORF5644P | |
| 5645 | YfdA | |||
| 357 | plasmid stabilisation protein | |||
| 358 | R | SsoST152ORF13040P (100% identity) | CTGCAG | EcoC9706IIIP |
| 359 | M | M.Sso8376ORF9905P (100% identity) | CTGCAG | M.EcoC9706III |
| 360 | bacteriophage protein | |||
| 4145 | prophage protein | |||
| 4146 | M | M.Eco8006ORF38P (100% identity) | M.EcoC9706ORF4146P | |
| 4147 | phage regulatory protein | |||
| 4258 | Lysis protein S | |||
| 4263 | M | M.EcoS945ORF3560P (100% identity) | M.EcoC9706ORF4263P | |
| 4264 | Uncharacterised protein | |||
| 4352 | Uncharacterised protein | |||
| 4353 | M | M.Sfl9783ORF2959P (99% identity) | M.EcoC9706ORF4353P | |
| 4354 | phage protein | |||
| 4438 | DMT superfamily transporter inner | |||
| 4439 | V | V.EcosEC7DcmP (100% identity) | V.EcoC9706DcmP | |
| 4440 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoC9706DcmP |
| 4441 | phosphohydrolase | |||
| 2658 | ribulose-phosphate 3-epimerase | |||
| 2659 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9706DamP |
| 2660 | DamX protein | |||
| 2778 | membrane protein | |||
| 2779 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC9706ORF2779P |
| 2780 | DNA-binding protein Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1665 | endoribonuclease SymE | |||
| 1666 | R | EcoSTEC508GmrSDP (100% identity) | EcoC9706GmrSDP | |
| 1667 | protein YjiS | |||