Escherichia coli NCTC9703 |
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Putative Escherichia coli NCTC9703 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,780,568 bp
GenBank #: UGEA00000000 (NZ_UGEA00000000)
REBASE acronym: EcoC9703
Org_num: 43859
All begin NCTC9703_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3707 | restriction methylase | |||
| 3708 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.EcoC9703I |
| 3709 | S | S.EcoO111ORFAP (100% identity) | CCANNNNNNNNTGAA | S.EcoC9703I |
| 3710 | R | EcoS7380ORFEP (100% identity) | CCANNNNNNNNTGAA | EcoC9703IP |
| 3711 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 270 | DMT superfamily transporter inner | |||
| 271 | V | V.SflFF59DcmP (100% identity) | V.EcoC9703DcmP | |
| 272 | M | M.EcoS7380DcmP (100% identity) | CCWGG | M.EcoC9703DcmP |
| 273 | phosphohydrolase | |||
| 61 | cytoplasmic protein | |||
| 62 | M | M.EcoC9111ORF5304P (100% identity) | M.EcoC9703ORF62P | |
| 63 | plasmid segregation protein | |||
| 6136 | Uncharacterised protein | |||
| 6137 | M | M.EcosB2CORFIP (64% identity) | M.EcoC9703ORF6137P | |
| 6138 | glutaminyl-tRNA synthetase | |||
| 333 | YjhS | |||
| 338 | M | M.EcoS7005ORFLP (100% identity) | M.EcoC9703ORF338P | |
| 339 | lipoprotein | |||
| 505 | replication protein for prophage | |||
| 506 | M | M.EcoSO40ORF23900P (100% identity) | M.EcoC9703ORF506P | |
| 507 | Uncharacterised protein | |||
| 592 | YjhS | |||
| 597 | M | M.EcoS6995ORFAP (100% identity) | M.EcoC9703ORF597P | |
| 598 | lipoprotein | |||
| 2233 | anti-adapter protein IraM | |||
| 2237 | M | M.EcoS7438ORFNP (100% identity) | M.EcoC9703ORF2237P | |
| 2238 | lipoprotein | |||
| 1234 | translation inhibitor protein RaiA | |||
| 1235 | M | M.Ecos154ORF1441P (100% identity) | M.EcoC9703ORF1235P | |
| 1236 | Tfp pilus assembly protein, major pilin PilA | |||
| 2470 | phage protein | |||
| 2475 | M | M.EcoDEC12EORF951P (100% identity) | M.EcoC9703ORF2475P | |
| 2476 | lipoprotein | |||
| 2763 | NinF protein | |||
| 2764 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.EcoC9703ORF2764P |
| 2765 | recombination protein ninB from phage origin | |||
| 3051 | LexA repressor | |||
| 3052 | M | M.EcoSO40ORF27175P (100% identity) | GATC | M.EcoC9703ORF3052P |
| 3053 | CPS-53 (KpLE1) prophage protein | |||
| 3703 | YjhS protein | |||
| 3704 | R | SflSTLE4ORF19250P (100% identity) | EcoC9703ORF3704P | |
| 3705 | McrC family protein, McrBC 5-methylcytosine | |||
| 4114 | Crossover junction | |||
| 4115 | M | M.EcoS7380ORFJP (100% identity) | GATC | M.EcoC9703ORF4115P |
| 4116 | CPS-53 (KpLE1) prophage protein | |||
| 4893 | DamX protein | |||
| 4894 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC9703DamP |
| 4895 | ribulose-phosphate 3-epimerase | |||
| 5009 | membrane protein | |||
| 5010 | M | M.EcoS7380ORFAP (100% identity) | ATGCAT | M.EcoC9703ORF5010P |
| 5011 | DNA-binding protein Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3704 | restriction endonuclease | |||
| 3705 | R | SflSTLE4McrCP (100% identity) | EcoC9703McrCP | |
| 3706 | R | SflSTLE4McrBP (100% identity) | EcoC9703McrBP | |
| 3707 | restriction methylase | |||