Escherichia coli NCTC9120 |
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Putative Escherichia coli NCTC9120 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,828,856 bp
GenBank #: UGFS00000000 (NZ_UGFS00000000)
REBASE acronym: EcoC9120
Org_num: 43854
All begin NCTC9120_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3991 | Uncharacterised protein | |||
| 3992 | R | SflC32ORFCP (99% identity) | GGANNNNNNNNGTTA | EcoC9120IP |
| 3993 | M | M.Sbo192ORF9605P (99% identity) | GGANNNNNNNNGTTA | M.EcoC9120I |
| 3994 | S | S.EcosLF82ORF3455P (70% identity) | GGANNNNNNNNGTTA | S.EcoC9120I |
| 3996 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4701 | R | EcoSCU484ORF25120P (100% identity) | GATATC | EcoC9120IIP |
| ??? | C | C.EcoNDM1ORF25400P (92% identity) | C.EcoC9120IIP | |
| 4702 | M | M.EcoSCU484ORF25120P (100% identity) | GATATC | M.EcoC9120II |
| 4704 | regulatory protein Rop | |||
| 361 | DamX protein | |||
| 362 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9120DamP |
| 363 | ribulose-phosphate 3-epimerase | |||
| 484 | membrane protein | |||
| 485 | M | M.PmeBin470ORFAP (99% identity) | ATGCAT | M.EcoC9120ORF485P |
| 486 | DNA-binding protein Fis | |||
| 1887 | phosphohydrolase | |||
| 1888 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC9120DcmP |
| 1889 | V | V.SflC32DcmP (74% identity) | V.EcoC9120DcmP | |
| 1890 | DMT superfamily transporter inner | |||
| 2693 | protein ninx | |||
| 2694 | M | M.EcoR11ORF20620P (100% identity) | GATC | M.EcoC9120ORF2694P |
| 2695 | recombination protein ninB from phage origin | |||
| 3044 | replication protein for prophage | |||
| 3045 | M | M.Eco7562ORF15290P (100% identity) | GATC | M.EcoC9120ORF3045P |
| 3046 | TraR/DksA family transcriptional regulator | |||
| 3585 | YagB/YeeU/YfjZ family protein | |||
| 3586 | M | M.EcoA39ORF18840P (100% identity) | M.EcoC9120ORF3586P | |
| 3587 | R | EcoA39ORF18840P (100% identity) | EcoC9120ORF3586P | |
| 3589 | gamma-glutamyl phosphate reductase | |||
| 3945 | LexA repressor | |||
| 3946 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.EcoC9120ORF3946P |
| 3947 | CPS-53 (KpLE1) prophage protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4029 | transposase | |||
| 4030 | R | EcoH22ORF21050P (100% identity) | EcoC9120ORF4031P | |
| ??? | M | M.EcoA6ORF22080P (99% identity) | M.EcoC9120ORF4031P | |
| 4033 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3994 | type I restriction enzyme EcoEI specificity | |||
| 3996 | R | Eho218GmrDP (99% identity) | EcoC9120GmrSDP | |
| 3997 | transposase YhgA-like protein | |||