Escherichia coli NCTC9117 |
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Putative Escherichia coli NCTC9117 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,125,687 bp
GenBank #: UGDC00000000 (NZ_UGDC00000000)
REBASE acronym: EcoC9117
Org_num: 43852
All begin NCTC9117_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 105 | Uncharacterised protein | |||
| 108 | M | M.Eco9071ORF4866P (99% identity) | M.EcoC9117ORF108P | |
| 109 | recombination associated protein | |||
| 643 | DamX protein | |||
| 644 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9117DamP |
| 645 | ribulose-phosphate 3-epimerase | |||
| 798 | membrane protein | |||
| 799 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC9117ORF799P |
| 800 | DNA-binding protein Fis | |||
| 2646 | phosphohydrolase | |||
| 2647 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoC9117DcmP |
| 2648 | V | V.SsoSE61DcmP (100% identity) | V.EcoC9117DcmP | |
| 2649 | DMT superfamily transporter inner | |||
| 3160 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC9117ORF3161P | |
| 3162 | transposase | |||
| 3620 | phage protein | |||
| 3626 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoC9117ORF3626P |
| 3627 | lipoprotein | |||
| 4581 | protein ninx | |||
| 4582 | M | M.Eco11114ORF3744P (100% identity) | GATC | M.EcoC9117ORF4582P |
| 4583 | recombination protein ninB from phage origin | |||
| 6039 | Uncharacterised protein | |||
| ??? | M | M.EcoDEC13DORF4454P (99% identity) | M.EcoC9117ORF6040P | |
| 6042 | Replication gene A protein (GpA) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5342 | GTP-binding protein YjiA | |||
| 5343 | R | Ssp28760MrrP (100% identity) | EcoC9117MrrP | |
| 5344 | type I restriction enzyme EcoKI subunit R | |||