Escherichia coli NCTC9111 |
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Putative Escherichia coli NCTC9111 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,883,482 bp
GenBank #: UASF00000000 (NZ_UASF00000000)
REBASE acronym: EcoC9111
Org_num: 43849
All begin NCTC9111_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4528 | restriction methylase | |||
| 4529 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.EcoC9111I |
| 4530 | S | S.EcoO111ORFAP (100% identity) | CCANNNNNNNNTGAA | S.EcoC9111I |
| 4531 | R | EcoS7380ORFEP (100% identity) | CCANNNNNNNNTGAA | EcoC9111IP |
| 4532 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5303 | plasmid segregation protein | |||
| 5304 | M | M.EcoC9703ORF62P (100% identity) | M.EcoC9111ORF5304P | |
| 5305 | cytoplasmic protein | |||
| 399 | YfdA | |||
| 400 | M | M.Eco8007ORF6057P (100% identity) | M.EcoC9111ORF400P | |
| 401 | cytoplasmic protein | |||
| 5620 | lipoprotein | |||
| 5621 | M | M.EcoS6995ORFAP (100% identity) | M.EcoC9111ORF5621P | |
| 5626 | YjhS | |||
| 5708 | Uncharacterised protein | |||
| 5709 | M | M.EcoSO40ORF23900P (100% identity) | M.EcoC9111ORF5709P | |
| 5710 | replication protein for prophage | |||
| 795 | DamX protein | |||
| 796 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC9111DamP |
| 797 | ribulose-phosphate 3-epimerase | |||
| 908 | membrane protein | |||
| 909 | M | M.EcoS7380ORFAP (100% identity) | ATGCAT | M.EcoC9111ORF909P |
| 910 | DNA-binding protein Fis | |||
| 5871 | lipoprotein | |||
| 5872 | M | M.EcoS7005ORFLP (100% identity) | M.EcoC9111ORF5872P | |
| 5877 | YjhS | |||
| 5937 | phosphohydrolase | |||
| 5938 | M | M.EcoS7380DcmP (100% identity) | CCWGG | M.EcoC9111DcmP |
| 5939 | V | V.SflFF59DcmP (100% identity) | V.EcoC9111DcmP | |
| 5940 | DMT superfamily transporter inner | |||
| 6026 | glutaminyl-tRNA synthetase | |||
| 6027 | M | M.EcoDEC12AORF5457P (100% identity) | M.EcoC9111ORF6027P | |
| 6028 | exonuclease RdgC | |||
| 6063 | prophage protein | |||
| 6064 | M | M.EcoDEC12AORF5417P (100% identity) | M.EcoC9111ORF6064P | |
| 6065 | Uncharacterised protein | |||
| 2074 | translation inhibitor protein RaiA | |||
| 2075 | M | M.Ecos154ORF1441P (100% identity) | M.EcoC9111ORF2075P | |
| 2076 | Tfp pilus assembly protein, major pilin PilA | |||
| 3028 | anti-adapter protein IraM | |||
| 3032 | M | M.EcoS7438ORFNP (100% identity) | M.EcoC9111ORF3032P | |
| 3033 | lipoprotein | |||
| 3259 | phage protein | |||
| 3264 | M | M.EcoDEC12EORF951P (100% identity) | M.EcoC9111ORF3264P | |
| 3265 | lipoprotein | |||
| 3536 | NinF protein | |||
| 3537 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.EcoC9111ORF3537P |
| 3538 | recombination protein ninB from phage origin | |||
| 3815 | LexA repressor | |||
| 3816 | M | M.EcoSO40ORF27175P (100% identity) | GATC | M.EcoC9111ORF3816P |
| 3817 | CPS-53 (KpLE1) prophage protein | |||
| 4524 | YjhS protein | |||
| 4525 | R | SflSTLE4ORF19250P (100% identity) | EcoC9111ORF4525P | |
| 4526 | McrC family protein, McrBC 5-methylcytosine | |||
| 4858 | Crossover junction | |||
| 4859 | M | M.EcoS7380ORFJP (100% identity) | GATC | M.EcoC9111ORF4859P |
| 4860 | CPS-53 (KpLE1) prophage protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4525 | restriction endonuclease | |||
| 4526 | R | SflSTLE4McrCP (100% identity) | EcoC9111McrCP | |
| 4527 | R | SflSTLE4McrBP (100% identity) | EcoC9111McrBP | |
| 4528 | restriction methylase | |||