Escherichia coli NCTC9103 |
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Putative Escherichia coli NCTC9103 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,045,731 bp
GenBank #: UGEO00000000 (NZ_UGEO00000000)
REBASE acronym: EcoC9103
Org_num: 43844
All begin NCTC9103_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3957 | Uncharacterised protein | |||
| 3958 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoC9103IP |
| 3959 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoC9103I |
| 3960 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoC9103I |
| 3962 | Uncharacterized conserved protein | |||
| 4002 | Uncharacterised protein | |||
| 4003 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.EcoC9103II |
| 4004 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcoC9103II |
| 4005 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4794 | cytoplasmic protein | |||
| 4795 | M | M.SflN101ORF24625P (100% identity) | M.EcoC9103ORF4795P | |
| 4796 | YfdA | |||
| 348 | DamX protein | |||
| 349 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC9103DamP |
| 350 | ribulose-phosphate 3-epimerase | |||
| 459 | membrane protein | |||
| 460 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC9103ORF460P |
| 461 | DNA-binding protein Fis | |||
| 1843 | phosphohydrolase | |||
| 1844 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC9103DcmP |
| 1845 | V | V.SsoSE61DcmP (100% identity) | V.EcoC9103DcmP | |
| 1846 | DMT superfamily transporter inner | |||
| 3024 | replication protein for prophage | |||
| 3025 | M | M.EcosA30ORF14440P (99% identity) | GATC | M.EcoC9103ORF3025P |
| 3026 | TraR/DksA family transcriptional regulator | |||
| 3998 | YjhS protein | |||
| 3999 | R | SflN101ORF11875P (100% identity) | EcoC9103ORF3999P | |
| 4000 | endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3960 | Type I restriction enzyme EcoAI specificity | |||
| 3962 | R | EcoEC361GmrDP (100% identity) | EcoC9103GmrDP | |
| ??? | R | SflN101GmrSP (100% identity) | EcoC9103GmrSP | |
| 3964 | protein YjiS | |||
| 3999 | restriction endonuclease | |||
| 4000 | R | SflN101McrBP (100% identity) | EcoC9103McrBP | |
| 4001 | R | SflN101McrCP (100% identity) | EcoC9103McrCP | |
| 4002 | Uncharacterised protein | |||