Escherichia coli NCTC9092 |
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Putative Escherichia coli NCTC9092 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,173,819 bp
GenBank #: UGDJ00000000 (NZ_UGDJ00000000)
REBASE acronym: Eco9092
Org_num: 43836
All begin NCTC9092_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1527 | metal-binding protein | |||
| 1528 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco9092ORF1529P |
| 1529 | M | M.Ecos142ORF9685P (99% identity) | GATGNNNNNNTAC | M.Eco9092ORF1529P |
| 1530 | IS911 transposase orfB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 134 | cytoplasmic protein | |||
| 135 | M | M.Sso3885ORF23215P (100% identity) | SAY | M.Eco9092ORF135P |
| 136 | YfdA | |||
| 440 | phage protein | |||
| 446 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco9092ORF446P |
| 447 | lipoprotein | |||
| 1585 | DMT superfamily transporter inner | |||
| 1586 | V | V.EcosEC7DcmP (100% identity) | V.Eco9092DcmP | |
| 1587 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco9092DcmP |
| 1588 | phosphohydrolase | |||
| 2244 | Protein of uncharacterised function (DUF3644) | |||
| 2245 | M | M.Kpn8895III (100% identity) | GAGCTC | M.Eco9092II |
| 2246 | R | Sen7349IP (100% identity) | GAGCTC | Eco9092IIP |
| 2247 | Conjugal transfer protein TraD | |||
| 2989 | DNA-binding protein Fis | |||
| 2990 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9092ORF2990P |
| 2991 | membrane protein | |||
| 3116 | ribulose-phosphate 3-epimerase | |||
| 3117 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9092Dam |
| 3118 | DamX protein | |||
| 4112 | Uncharacterised protein | |||
| 4113 | R | Ecos19ORF20635P (100% identity) | Eco9092ORF4113P | |
| 4114 | Uncharacterised protein | |||
| 4115 | histidin kinase-like protein | |||
| 4116 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco9092ORF4116P |
| 4117 | Uncharacterised protein | |||
| 4185 | Uncharacterised protein | |||
| 4186 | R | Ecos19ORF20235P (100% identity) | Eco9092ORF4186P | |
| 4187 | YjhS protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4182 | helicase | |||
| 4183 | M | M.Ecos19ORF20250P (100% identity) | GAGCC | M.Eco9092I |
| 4184 | R | Ecos19ORF20250P (100% identity) | GAGCC | Eco9092IP |
| 4185 | Uncharacterised protein | |||