Escherichia coli NCTC9079 |
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Putative Escherichia coli NCTC9079 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,761,638 bp
GenBank #: UGCB00000000 (NZ_UGCB00000000)
REBASE acronym: Eco9079
Org_num: 43830
All begin NCTC9079_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1924 | IS30 transposase encoded within prophage | |||
| 1926 | M | M.Kae10004ORF5337P (48% identity) | GATGNNNNNNTTG | M1.Eco9079ORF1926P |
| 1927 | M | M.SflFF17ORF9165P (67% identity) | GATGNNNNNNTTG | M2.Eco9079ORF1926P |
| 1928 | S | S.EcoA14I (100% identity) | GATGNNNNNNTTG | S.Eco9079ORF1926P |
| 1929 | metal-binding protein | |||
| 1930 | R | EcoA14IP (99% identity) | GATGNNNNNNTTG | Eco9079ORF1926P |
| 1931 | hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 31 | Replication gene A protein (GpA) | |||
| ??? | R | Ecostr10ORF20P (93% identity) | GRGCYC | Eco9079ORF33P |
| ??? | C | C.Sen24590ORF20925P (91% identity) | C.Eco9079ORF33P | |
| 33 | M | M.EcoSC418ORFCP (90% identity) | GRGCYC | M.Eco9079ORF33P |
| 34 | phage capsid protein | |||
| 409 | DamX protein | |||
| 410 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9079DamP |
| 411 | ribulose-phosphate 3-epimerase | |||
| 517 | membrane protein | |||
| 518 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco9079ORF518P |
| 519 | DNA-binding protein Fis | |||
| 1717 | Replication gene A protein (GpA) | |||
| 1718 | R | Ecostr10ORF20P (100% identity) | GRGCYC | Eco9079ORF1719P |
| ??? | C | C.Ecostr10ORF20P (100% identity) | C.Eco9079ORF1719P | |
| 1719 | M | M.EcoSC418ORFCP (90% identity) | GRGCYC | M.Eco9079ORF1719P |
| 1720 | phage capsid protein | |||
| 1872 | phosphohydrolase | |||
| 1873 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco9079DcmP |
| 1874 | V | V.SflSTLE3DcmP (100% identity) | V.Eco9079DcmP | |
| 1875 | DMT superfamily transporter inner | |||
| 3008 | replication protein for prophage | |||
| 3009 | M | M.Eco9041ORF2904P (100% identity) | GATC | M.Eco9079ORF3009P |
| 3010 | TraR/DksA family transcriptional regulator | |||