Escherichia coli NCTC9070 |
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Putative Escherichia coli NCTC9070 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,953,944 bp
GenBank #: UGEI00000000 (NZ_UGEI00000000)
REBASE acronym: Eco9070
Org_num: 43824
All begin NCTC9070_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1986 | Uncharacterised protein | |||
| 1987 | M | M.Eco9080I (100% identity) | TAAGNNNNNRTG | M.Eco9070II |
| 1988 | S | S2.EcoD181ORFHP (100% identity) | TAAGNNNNNRTG | S1.Eco9070II |
| 1989 | S | S.EcoG5ORF9385P (54% identity) | TAAGNNNNNRTG | S2.Eco9070II |
| 1990 | metal-binding protein | |||
| 1991 | Uncharacterised protein | |||
| 1992 | R | Eco9080IP (100% identity) | TAAGNNNNNRTG | Eco9070IIP |
| 1993 | hydrolase | |||
| 4072 | methylated adenine and cytosine restriction | |||
| 4073 | R | Eco266ORF19185P (99% identity) | CTANNNNNNNNTTGG | Eco9070IP |
| 4074 | M | M.EmaW492ORF3485P (99% identity) | CTANNNNNNNNTTGG | M.Eco9070I |
| 4075 | S | S.Eco36C20ORF21195P (97% identity) | CTANNNNNNNNTTGG | S.Eco9070I |
| 4117 | restriction methylase | |||
| ??? | M | M.Eco6563ORF17875P (96% identity) | M.Eco9070ORF4118P | |
| 4119 | S | S.Ecos4422ORF22930P (69% identity) | S.Eco9070ORF4118P | |
| 4120 | R | Eco6563ORF17875P (99% identity) | Eco9070ORF4118P | |
| 4122 | oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4752 | recombination associated protein | |||
| 4753 | M | M.EcoFu022ORF23585P (100% identity) | M.Eco9070ORF4753P | |
| 4756 | tellurite resistance protein TerB | |||
| 357 | DamX protein | |||
| 358 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9070DamP |
| 359 | ribulose-phosphate 3-epimerase | |||
| 472 | membrane protein | |||
| 473 | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.Eco9070ORF473P |
| 474 | DNA-binding protein Fis | |||
| 1104 | TraR/DksA family transcriptional regulator | |||
| 1105 | M | M.EcotcmA3ORF19725P (100% identity) | GATC | M.Eco9070ORF1105P |
| 1106 | replication protein for prophage | |||
| 1417 | recombination protein ninB from phage origin | |||
| 1418 | M | M.Eco87042ORFOP (59% identity) | M.Eco9070ORF1418P | |
| 1420 | bacteriophage Lambda NinG protein | |||
| 1916 | phosphohydrolase | |||
| 1917 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco9070Dcm |
| 1918 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco9070DcmP |
| 1919 | DMT superfamily transporter inner | |||
| 3747 | phage protein | |||
| 3748 | M | M.EcoTL14ORF18050P (100% identity) | M.Eco9070ORF3748P | |
| 3749 | ybl17 | |||
| 4113 | endonuclease | |||
| 4114 | R | EcoPSJ29ORF37350P (100% identity) | Eco9070ORF4114P | |
| 4115 | McrC family protein, McrBC 5-methylcytosine | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4071 | GTP-binding protein YjiA | |||
| 4072 | R | Ssp28760MrrP (100% identity) | Eco9070MrrP | |
| 4073 | type I restriction enzyme EcoKI subunit R | |||
| 4114 | restriction endonuclease | |||
| 4115 | R | EcoPSJ29McrC2P (100% identity) | Eco9070McrCP | |
| 4116 | R | EcoPSJ29McrB2P (100% identity) | Eco9070McrBP | |
| 4117 | restriction methylase | |||