Escherichia coli NCTC9055 |
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Putative Escherichia coli NCTC9055 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,454,264 bp
GenBank #: UGCS00000000 (NZ_UGCS00000000)
REBASE acronym: Eco9055
Org_num: 43815
All begin NCTC9055_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1243 | Uncharacterised protein | |||
| 1244 | M | M.EcoMS851ORF22160P (100% identity) | GTCANNNNNTTC | M.Eco9055I |
| 1245 | S | S.EcoMS851ORF22160P (100% identity) | GTCANNNNNTTC | S.Eco9055I |
| 1246 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5227 | phage uncharacterized protein, C-terminal | |||
| 5228 | M | M.EspP049ORF3912P (100% identity) | M.Eco9055ORF5228P | |
| 5229 | DNA-binding protein | |||
| 5306 | YfdA | |||
| 5307 | M | M.EcoC9121ORF217P (100% identity) | M.Eco9055ORF5307P | |
| 5308 | cytoplasmic protein | |||
| 548 | LexA repressor | |||
| 549 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco9055ORF549P |
| 550 | CPS-53 (KpLE1) prophage protein | |||
| 806 | Tfp pilus assembly protein, major pilin PilA | |||
| 807 | M | M.EcoDEC14BORF3127P (98% identity) | M.Eco9055ORF807P | |
| 808 | methylisocitrate lyase | |||
| 1239 | YjhS protein | |||
| 1240 | R | EcoMS851ORF22140P (100% identity) | Eco9055ORF1240P | |
| 1241 | endonuclease | |||
| 1556 | Lysis protein S | |||
| 1558 | M | M.Eco9078ORF5116P (100% identity) | M.Eco9055ORF1558P | |
| 1559 | lipoprotein | |||
| 1565 | LexA repressor | |||
| 1566 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.Eco9055ORF1566P |
| 1567 | CPS-53 (KpLE1) prophage protein | |||
| 2296 | DamX protein | |||
| 2297 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9055DamP |
| 2298 | ribulose-phosphate 3-epimerase | |||
| 2424 | membrane protein | |||
| 2425 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco9055ORF2425P |
| 2426 | DNA-binding protein Fis | |||
| 3887 | phosphohydrolase | |||
| 3888 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.Eco9055DcmP |
| 3889 | V | V.SflFF59DcmP (100% identity) | V.Eco9055DcmP | |
| 3890 | DMT superfamily transporter inner | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1240 | restriction endonuclease | |||
| 1241 | R | Ecows53McrBP (100% identity) | Eco9055McrBP | |
| 1242 | R | Ecows53McrCP (100% identity) | Eco9055McrCP | |
| 1243 | Uncharacterised protein | |||