Escherichia coli NCTC9029 |
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Putative Escherichia coli NCTC9029 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,161,203 bp
GenBank #: UGDE00000000 (NZ_UGDE00000000)
REBASE acronym: Eco9029
Org_num: 43800
All begin NCTC9029_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4573 | restriction methylase | |||
| ??? | M | M.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | M.Eco9029I |
| 4576 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco9029I |
| ??? | R | EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | Eco9029IP |
| 4579 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5457 | protein stbB | |||
| 5458 | M | M.Sso128ORF27515P (100% identity) | SAY | M.Eco9029ORF5458P |
| 5459 | cytoplasmic protein | |||
| 387 | DamX protein | |||
| 388 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9029DamP |
| 389 | ribulose-phosphate 3-epimerase | |||
| 521 | membrane protein | |||
| 522 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco9029ORF522P |
| 523 | DNA-binding protein Fis | |||
| 1760 | CPS-53 (KpLE1) prophage protein | |||
| 1761 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.Eco9029ORF1761P |
| 1762 | LexA repressor | |||
| 2177 | lipoprotein | |||
| 2178 | M | M.EcoSCU103ORF10815P (100% identity) | M.Eco9029ORF2178P | |
| 2181 | TolA protein (fragment) of prophage | |||
| 3101 | DMT superfamily transporter inner | |||
| 3102 | V | V.SsoSE61DcmP (100% identity) | V.Eco9029DcmP | |
| 3103 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco9029DcmP |
| 3104 | phosphohydrolase | |||
| 3360 | TciA/TerB-like protein | |||
| 3364 | M | M.EcoST05ORF11640P (100% identity) | M.Eco9029ORF3364P | |
| 3365 | lipoprotein | |||
| 4568 | YjhS protein | |||
| 4569 | R | EcoSCU103ORF3050P (100% identity) | Eco9029ORF4569P | |
| 4570 | McrC family protein, McrBC 5-methylcytosine | |||
| 4627 | prophage polarity suppression protein | |||
| ??? | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco9029ORF4628P |
| 4630 | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco9029ORF4628P |
| 4631 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco9029ORF4628P |
| 4632 | site-specific recombinase, phage integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4569 | restriction endonuclease | |||
| ??? | R | SflSTLE4McrCP (100% identity) | Eco9029McrCP | |
| 4572 | R | Eco1466McrBP (100% identity) | Eco9029McrBP | |
| 4573 | restriction methylase | |||